Gene
| Gene Model ID | pfu_aug2.0_315.1_17280 |
|---|---|
| Locus | scaffold315.1 : 296540 ... 302872 : + |
| To GenomeBrowser | scaffold315.1:296540..302872 |
| Genes list of scaffold | scaffold315.1 |
| Synonym | pfu_aug1.0_71500.1_71072 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| prostaglandin e2 receptor ep4 subtype | GO:0004871 GO:0044763 GO:0050794 GO:0051716 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_315.1_17280.t1 | 1 | 1 | 7TM_GPCR_Srx | 41 | 275 | 8.8e-11 | 41.4 | 5.8e-14 | 1.2e-10 | 40.9 |
| pfu_aug2.0_315.1_17280.t1 | 1 | 1 | 7tm_1 | 48 | 280 | 4.1e-33 | 114.6 | 2.3e-36 | 4.9e-33 | 114.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_315.1_17280.t1 | gi|260823840|ref|XP_002606876.1| | hypothetical protein BRAFLDRAFT_126346 [Branchiostoma floridae] | 5.99756e-43 |
| pfu_aug2.0_315.1_17280.t1 | gi|260823842|ref|XP_002606877.1| | hypothetical protein BRAFLDRAFT_126347 [Branchiostoma floridae] | 2.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_315.1_17280.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_315.1_17280.t1 atgtccctgctgtatttaaacgcaacaatcatcagtgacgtagacccattcaatgcatcaggactgaatgaaactacaga catgtttttggccactccatcaaattcactgatcattgttatgttcgcgaccggctgttttggcaaccttctagcgcttt atgtactttgtagaacatcgaaaaagcacaaatggaaaacgtttaacaaacttgtgggattactggctattttcgacttt tcgggcattctagcgatcacacccgttacgctattggtgtattcgaacgaactgaaatgggtcggtggacaacacctctg tgattattactcattttttatgatattttccggacttataacggttcttacagttggactgatgtcgctggacagattta tggcagtgtgtttgccttacttctacaaggtaaatatcaaaccgaaaattgtcaacatcatcatgatcgccatattcctc tgtgccttcctaatagcagtgttaccaattgctcatttcggaagtaatgtaatccatgagcccgggtcgtggtgcttttt tgattttcatggtgtttccattctacagcgcttgtactcttactcttatgccttcatcggaatgttcataatcagtttga ccaccattttgaacatcatacttattatttaccttggaagagaacggaaacggaaagacaatgaacaaagaaaatcaagt gtaaatagcatcagtaaccggatccggaaacaaaacgatatttacttcatggtattcctttccggtatccttctcgtttt cggaatatgctggacacctttcatggtaagatatatgttaattgtgatattttaa |
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Protein
| Protein ID | pfu_aug2.0_315.1_17280.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_315.1_17280.t1 MSLLYLNATIISDVDPFNASGLNETTDMFLATPSNSLIIVMFATGCFGNLLALYVLCRTSKKHKWKTFNKLVGLLAIFDF SGILAITPVTLLVYSNELKWVGGQHLCDYYSFFMIFSGLITVLTVGLMSLDRFMAVCLPYFYKVNIKPKIVNIIMIAIFL CAFLIAVLPIAHFGSNVIHEPGSWCFFDFHGVSILQRLYSYSYAFIGMFIISLTTILNIILIIYLGRERKRKDNEQRKSS VNSISNRIRKQNDIYFMVFLSGILLVFGICWTPFMVRYMLIVIF |
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