Gene
| Gene Model ID | pfu_aug2.0_3158.1_29043 |
|---|---|
| Locus | scaffold3158.1 : 5076 ... 35634 : + |
| To GenomeBrowser | scaffold3158.1:5076..35634 |
| Genes list of scaffold | scaffold3158.1 |
| Synonym | pfu_aug1.0_62.1_14759 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3158.1_29043.t2 | 1 | 1 | PDZ | 153 | 231 | 6.3e-13 | 48.7 | 4.1e-16 | 2.0e-12 | 47.0 |
| pfu_aug2.0_3158.1_29043.t2 | 1 | 1 | SAM_1 | 923 | 985 | 2.7e-09 | 37.0 | 1.2e-12 | 6.2e-09 | 35.9 |
| pfu_aug2.0_3158.1_29043.t2 | 1 | 1 | SAM_2 | 924 | 985 | 5.6e-13 | 48.5 | 2.5e-16 | 1.3e-12 | 47.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3158.1_29043.t2 | gi|562858144|ref|XP_006157549.1| | PREDICTED: neurabin-1-like isoform X1 [Tupaia chinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3158.1_29043.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3158.1_29043.t1 atgattataatagacaagcccacgaggcatactctggccagtatccaagccaggaggctctcagtgcaagaatctcgaag tggtgtttacattgagcagaggtctcaagaaaagggatcaggggaaattccaccaagagaggcgggagatggtcatgaac accctgacgtcattttgagtgatggtcatgacagaccagatctgaccaatggatttcaagctttcatagagatagatgga ttacccagcagtgacgagtccgactcggaggacgtagatatcgactacagaaaaccttctaggatcactttcagtaaagc accaattagggtatttcccacattttcaacggaagagtacgaccggcggaatgaagatgtagatcctgtggcggcatcag cggaatatgaactggaaaaacgtgtggagaagatggacgtattcccggtcgacctgattaaaggtgcggaaggtcttggt ctcagtatcattggtatgggagtcggggccgatgctgggcttgaaaaactcgggattttcatcaagacgttaacggcagg tggtgcagctcaacaggatggcaggattcaagtgaatgaccagataatagaagtagatggtaaaagtttggttggtgtca cacaagcatacgcagcctctgtactcaggaataccagtggtcaggtcaagtttatgattggtcgagagaaggaccccagt aaaagtgaggttgcccgtctgatccagcagtccttggaacaagacaggaaacgagaggttctcaggaaacaggagcaaga aagattacaggagcttcacgatagactgaagccccgggacgaagtgctcgagcacgagcatcttgaacacctcaggaaaa tgtccgagagcgagacggggagggaactagatgacacagatgacgaagatgaagatgatgatgatgaaatagatgatgat aaggacatagacgaatcagagatgatggaagatacagatcacactgatcatgtgatgacaaatggacaggaagttgatca tgctgccatggatacgatggaaacggcagcaggggagagcacccctattgaacttccgtcagaaatggacagtaatgata acagtttagattcaccagaagagaagcctgcgatagaggtatttgatttaaaggagagcagtagtgaatcagtgtcaccc gacatggaatcacaagccttgtttgtcaaacttaaagaggcccagtataaaaatgccgtcacagaggcagagttagcaaa agtgaaggggaggattattttgttagaaagttccgaaaatcagaggaaagattatgaaaagaaatgtgaacagatggcgc aaaggttacgtgacgtggagaaaaagttagaaagtaaccgtaaagaaatgaatcattaccaggacctgctggaggggtcc cagggacagtatatagcactcgagaaaaaaatgaaaaacgacttcgtagctttggagaaaaaatatcataaagcgaaaaa actgataaaggaatatcaacaaagggagaaggactttatacaagagagggagagtctgatgcagcaacaggcagagaagg accagcagtacgactccctggttaaatcactcaaagataggatcttccgtttggagcgtgaccttggggaagcacaaaga gcagcaggattgccagtgctgattccaagtgaagggtcaaggtcagaggatactgttgtcaagacaaccatatcacctgt gaaatcagcaaataaagaagtgaagcccattcagccaacattgttagataatctgtccttatcatcaagttctgatgggt caccgccagagggagctgtcagtgcaggagagaagttggatgatgatgctatgtcagacagcttcagagatgtcattcct gccactcagctgttagatactacagccaatcgggacaaaggtcaactggggacgtcaggggtcaacgcaagtaggcgacc tccaactaaacggaacaagtctcaggacagtgaaaatgatgtagctgaagaagccaaagttgacggagagagtggcctgg aaacatggataaaacatgatagtgatttgggtagcgatagcgatgatttcgatgattttgacgatgatgagtttgacgat gactacacagatgatgtcgacagcacggtcaagaaaagtgacgctaaaaagagaaaagcacagcagtttttattacagcc cccaaatgtacccccaccccctcctcccccacaggggcctgatagtgattcccattccgagatgtctgcttcaaggcagg acagtgaatcagaggaatcagcctccacagtgtcccagacgtcttacgacccctcacaaccgtgcttcaaaaatatggag tcggaaatccccgactctgtttccatagaaaccatggatactttggacagtggcagctcaaccagtgtaacctcagggtc aaagcctagcaaagggataggattgtccaaacttcttaaatttggaaaaagcagttcaagcaattcaggcggtattgtgc tattatcaaataaatctctcgacaaaggcacagcgccccctagtggggatggagggataactcttttgtcaaagcgacct ctcgatgtcacaagctctgcagattcgctggacggtgttagtttggcgagtgatgtgtcgtcatcgtacatggtacagga atatgatgatgaagacggcaagaaaactatgtttacgttcaatatatcagggacccctgctatggaggagaaatctccca gtaagcgtgtgatgaaccagatacagtcagcatcgatatctgattggacgatagacaacgtctgccattggttgatgggt ctagaactcgacaaatatattcctctctttgaagataaaaatatcacaggatcggcactactgcagctagatgggaccaa attacggacaatgggtgtagcaaatagtaaagacagagaattgatgaaaaagaaaattaaggacattaaacagacaatgg aaaaagagaagaaaatgcaggaaaaagagaaaaaggcaaaagaaaaagaacaaaagaagcaagcgaaaaagaaatga |
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| Transcript ID | pfu_aug2.0_3158.1_29043.t2 |
| Definition | - |
>pfu_aug2.0_3158.1_29043.t2 atgattataatagacaagcccacgaggcatactctggccagtatccaagccaggaggctctcagtgcaagaatctcgaag tggtgtttacattgagcagaggtctcaagaaaagggatcaggggaaattccaccaagagaggcgggagatggtcatgaac accctgacgtcattttgagtgatggtcatgacagaccagatctgaccaatggatttcaagctttcatagagatagatgga ttacccagcagtgacgagtccgactcggaggacgtagatatcgactacagaaaaccttctaggatcactttcagtaaagc accaattagggtatttcccacattttcaacggaagagtacgaccggcggaatgaagatgtagatcctgtggcggcatcag cggaatatgaactggaaaaacgtgtggagaagatggacgtattcccggtcgacctgattaaaggtgcggaaggtcttggt ctcagtatcattggtatgggagtcggggccgatgctgggcttgaaaaactcgggattttcatcaagacgttaacggcagg tggtgcagctcaacaggatggcaggattcaagtgaatgaccagataatagaagtagatggtaaaagtttggttggtgtca cacaagcatacgcagcctctgtactcaggaataccagtggtcaggtcaagtttatgattggtcgagagaaggaccccagt aaaagtgaggttgcccgtctgatccagcagtccttggaacaagacaggaaacgagaggttctcaggaaacaggagcaaga aagattacaggagcttcacgatagactgaagccccgggacgaagtgctcgagcacgagcatcttgaacacctcaggaaaa tgtccgagagcgagacggggagggaactagatgacacagatgacgaagatgaagatgatgatgatgaaatagatgatgat aaggacatagacgaatcagagatgatggaagatacagatcacactgatcatgtgatgacaaatggacaggaagttgatca tgctgccatggatacgatggaaacggcagcaggggagagcacccctattgaacttccgtcagaaatggacagtaatgata acagtttagattcaccagaagagaagcctgcgatagaggtatttgatttaaaggagagcagtagtgaatcagtgtcaccc gacatggaatcacaagccttgtttgtcaaacttaaagaggcccagtataaaaatgccgtcacagaggcagagttagcaaa agtgaaggggaggattattttgttagaaagttccgaaaatcagaggaaagattatgaaaagaaatgtgaacagatggcgc aaaggttacgtgacgtggagaaaaagttagaaagtaaccgtaaagaaatgaatcattaccaggacctgctggaggggtcc cagggacagtatatagcactcgagaaaaaaatgaaaaacgacttcgtagctttggagaaaaaatatcataaagcgaaaaa actgataaaggaatatcaacaaagggagaaggactttatacaagagagggagagtctgatgcagcaacaggcagagaagg accagcagtacgactccctggttaaatcactcaaagataggatcttccgtttggagcgtgaccttggggaagcacaaaga gcagcaggattgccagtgctgattccaagtgaagggtcaaggtcagaggatactgttgtcaagacaaccatatcacctgt gaaatcagcaaataaagaagtgaagcccattcagccaacattgttagataatctgtccttatcatcaagttctgatgggt caccgccagagggagctgtcagtgcaggagagaagttggatgatgatgctatgtcagacagcttcagagatgtcattcct gccactcagctgttagatactacagccaatcgggacaaaggtcaactggggacgtcaggggtcaacgcaagtaggcgacc tccaactaaacggaacaagtctcaggacagtgaaaatgatgtagctgaagaagccaaagttgacggagagagtggcctgg aaacatggataaaacatgatagcgacagcacggtcaagaaaagtgacgctaaaaagagaaaagcacagcagtttttatta cagcccccaaatgtacccccaccccctcctcccccacaggggcctgatagtgattcccattccgagatgtctgcttcaag gcaggacagtgaatcagaggaatcagcctccacagtgtcccagacgtcttacgacccctcacaaccgtgcttcaaaaata tggagtcggaaatccccgactctgtttccatagaaaccatggatactttggacagtggcagctcaaccagtgtaacctca gggtcaaagcctagcaaagggataggattgtccaaacttcttaaatttggaaaaagcagttcaagcaattcaggcggtat tgtgctattatcaaataaatctctcgacaaaggcacagcgccccctagtggggatggagggataactcttttgtcaaagc gacctctcgatgtcacaagctctgcagattcgctggacggtgttagtttggcgagtgatgtgtcgtcatcgtacatggta caggaatatgatgatgaagacggcaagaaaactatgtttacgttcaatatatcagggacccctgctatggaggagaaatc tcccagtaagcgtgtgatgaaccagatacagtcagcatcgatatctgattggacgatagacaacgtctgccattggttga tgggtctagaactcgacaaatatattcctctctttgaagataaaaatatcacaggatcggcactactgcagctagatggg accaaattacggacaatgggtgtagcaaatagtaaagacagagaattgatgaaaaagaaaattaaggacattaaacagac aatggaaaaagagaagaaaatgcaggaaaaagagaaaaaggcaaaagaaaaagaacaaaagaagcaagcgaaaaagaaat ga |
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Protein
| Protein ID | pfu_aug2.0_3158.1_29043.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3158.1_29043.t1 MIIIDKPTRHTLASIQARRLSVQESRSGVYIEQRSQEKGSGEIPPREAGDGHEHPDVILSDGHDRPDLTNGFQAFIEIDG LPSSDESDSEDVDIDYRKPSRITFSKAPIRVFPTFSTEEYDRRNEDVDPVAASAEYELEKRVEKMDVFPVDLIKGAEGLG LSIIGMGVGADAGLEKLGIFIKTLTAGGAAQQDGRIQVNDQIIEVDGKSLVGVTQAYAASVLRNTSGQVKFMIGREKDPS KSEVARLIQQSLEQDRKREVLRKQEQERLQELHDRLKPRDEVLEHEHLEHLRKMSESETGRELDDTDDEDEDDDDEIDDD KDIDESEMMEDTDHTDHVMTNGQEVDHAAMDTMETAAGESTPIELPSEMDSNDNSLDSPEEKPAIEVFDLKESSSESVSP DMESQALFVKLKEAQYKNAVTEAELAKVKGRIILLESSENQRKDYEKKCEQMAQRLRDVEKKLESNRKEMNHYQDLLEGS QGQYIALEKKMKNDFVALEKKYHKAKKLIKEYQQREKDFIQERESLMQQQAEKDQQYDSLVKSLKDRIFRLERDLGEAQR AAGLPVLIPSEGSRSEDTVVKTTISPVKSANKEVKPIQPTLLDNLSLSSSSDGSPPEGAVSAGEKLDDDAMSDSFRDVIP ATQLLDTTANRDKGQLGTSGVNASRRPPTKRNKSQDSENDVAEEAKVDGESGLETWIKHDSDLGSDSDDFDDFDDDEFDD DYTDDVDSTVKKSDAKKRKAQQFLLQPPNVPPPPPPPQGPDSDSHSEMSASRQDSESEESASTVSQTSYDPSQPCFKNME SEIPDSVSIETMDTLDSGSSTSVTSGSKPSKGIGLSKLLKFGKSSSSNSGGIVLLSNKSLDKGTAPPSGDGGITLLSKRP LDVTSSADSLDGVSLASDVSSSYMVQEYDDEDGKKTMFTFNISGTPAMEEKSPSKRVMNQIQSASISDWTIDNVCHWLMG LELDKYIPLFEDKNITGSALLQLDGTKLRTMGVANSKDRELMKKKIKDIKQTMEKEKKMQEKEKKAKEKEQKKQAKKK |
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| Protein ID | pfu_aug2.0_3158.1_29043.t2 |
| Definition | - |
>pfu_aug2.0_3158.1_29043.t2 MIIIDKPTRHTLASIQARRLSVQESRSGVYIEQRSQEKGSGEIPPREAGDGHEHPDVILSDGHDRPDLTNGFQAFIEIDG LPSSDESDSEDVDIDYRKPSRITFSKAPIRVFPTFSTEEYDRRNEDVDPVAASAEYELEKRVEKMDVFPVDLIKGAEGLG LSIIGMGVGADAGLEKLGIFIKTLTAGGAAQQDGRIQVNDQIIEVDGKSLVGVTQAYAASVLRNTSGQVKFMIGREKDPS KSEVARLIQQSLEQDRKREVLRKQEQERLQELHDRLKPRDEVLEHEHLEHLRKMSESETGRELDDTDDEDEDDDDEIDDD KDIDESEMMEDTDHTDHVMTNGQEVDHAAMDTMETAAGESTPIELPSEMDSNDNSLDSPEEKPAIEVFDLKESSSESVSP DMESQALFVKLKEAQYKNAVTEAELAKVKGRIILLESSENQRKDYEKKCEQMAQRLRDVEKKLESNRKEMNHYQDLLEGS QGQYIALEKKMKNDFVALEKKYHKAKKLIKEYQQREKDFIQERESLMQQQAEKDQQYDSLVKSLKDRIFRLERDLGEAQR AAGLPVLIPSEGSRSEDTVVKTTISPVKSANKEVKPIQPTLLDNLSLSSSSDGSPPEGAVSAGEKLDDDAMSDSFRDVIP ATQLLDTTANRDKGQLGTSGVNASRRPPTKRNKSQDSENDVAEEAKVDGESGLETWIKHDSDSTVKKSDAKKRKAQQFLL QPPNVPPPPPPPQGPDSDSHSEMSASRQDSESEESASTVSQTSYDPSQPCFKNMESEIPDSVSIETMDTLDSGSSTSVTS GSKPSKGIGLSKLLKFGKSSSSNSGGIVLLSNKSLDKGTAPPSGDGGITLLSKRPLDVTSSADSLDGVSLASDVSSSYMV QEYDDEDGKKTMFTFNISGTPAMEEKSPSKRVMNQIQSASISDWTIDNVCHWLMGLELDKYIPLFEDKNITGSALLQLDG TKLRTMGVANSKDRELMKKKIKDIKQTMEKEKKMQEKEKKAKEKEQKKQAKKK |
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