Gene
| Gene Model ID | pfu_aug2.0_3161.1_05770 |
|---|---|
| Locus | scaffold3161.1 : 26096 ... 68368 : + |
| To GenomeBrowser | scaffold3161.1:26096..68368 |
| Genes list of scaffold | scaffold3161.1 |
| Synonym | pfu_aug1.0_19694.1_47333 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3161.1_05770.t2 | 2 | 1 | VPS9 | 115 | 139 | 6.1e-28 | 96.8 | 1.1 | 4000.0 | -2.2 |
| pfu_aug2.0_3161.1_05770.t2 | 1 | 1 | HRM | 155 | 213 | 5.8e-15 | 55.0 | 3.4e-18 | 1.2e-14 | 53.9 |
| pfu_aug2.0_3161.1_05770.t2 | 2 | 2 | VPS9 | 1168 | 1269 | 6.1e-28 | 96.8 | 6.9e-31 | 2.6e-27 | 94.8 |
Transcript
| Transcript ID | pfu_aug2.0_3161.1_05770.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3161.1_05770.t1 atgaagattcatcgcgtgacatatgttacaattatatcttttatactggtgacatgcagagaagtgggggattgtgaagt gacacaacgtgtcgacaagccagtgagaaccacagggaacattgcaaattcccgtacatatacatccacagtagtatacc gagagcgcaataggcaaagtttgttaaagtcaagacttaaacagattttggaacgaatttattgtgataataagagtaga aattatcgaacatatctgtctggacaatatgatcagtttgaattgaaaaacgattctggattcagagacccatggaacaa tatcgtaaagactaaaagtttttcaaagatgcttgagaggtacaaacgtgacgttcacgaaatgacggacagtgagcctt atgtcatgacaaatacaacaaataggtgtgaaaatgtttcggcagacttcaaagatgacggtatttactgtaacatgact tgggatatgctgtcgtgttggcccgtcactcctgctggaaaatatgcaataatttcctgccctgaaaacttggaacatct tattgatcccacaaaaaatgcaacaaaattctgctacctaaacgggacatgggccagcagagctaattacaacaactgct ttatacaaagccagaagacaaacgaccttgctagcagtgataagtttgaagaaatagatgccatctgtggtgtgatatac attcttggatattctgtctctacagtagcattacttgcagctctcttcatctttatgtatttcagtatgttgttgcttat gacccgtaggtttcacatcaccttgacccaaggagatgagaccaaatccacagtaagtgacacatggagtacagacgtac tagcgagtgactctgagcccccggagaatcagtatgacagattagaggaagtggtcagacagagcctgcttataaaacaa gagcacgtttctgaggtatcagagacagcaagtgatgcttggagtatggacgtattggccagcgatacagaagagaaaca agctctgtccgagtttgatcaggatgatataggtagtgtgacagacctagcatccatgtctggagaccaagcacaggccg atctacctgaaggtagacagagtcccaccgaggaccagcaggatttactcggtgccaccggcatggactccggaccaccg gcaccttacgacaacgaaccgtttatacccagaaccagtgattctagtctacctggcaagtctaaacatccaagaaggcc aggaagaagtattgataatgtttttgctgataacgatgaacctgtgttatcaaccagatcgcaagaaattcagatttctg atgcaaatagactgagtataccggtaaaacaaccgagaccacattctgcagggcggtcagggagtcatggtcgtcacggt ccattgctctcggtccccgaacacagttcaaccgtgacatcttctaagccggtaaatagtagtacagagatactgggacc acctccaccgttacagaacctagaaggaaacaaaccaatgatgtctttcatgccaccgaatataggcaacattcccttaa caagtgatgtatctaaagctggagataattcattgaagaagctggagagttctgatttacaggagcttgagaatttgtcg tttgagaaccctgtgtttaatggaggagcccgaccaaagcagaggtcaagctgtccccagattggtagtcgtgacaaaga ttttataaggaaagaaaatgaacaaaagaaggcacgttctgtgatagaatggacggcatcctgctctacagattccggaa taggcggaactccacattcactggaatcccaatccatggattctctactagtccagaatgaccgatcctcacagcaatcc atggattcattcgccgaccaatcaggagtcctcaaaatttctgaacaacagaacactaatttcaatgccaacaggctctc ggaagctttatctatgtttgatccgtattcctccgattctcacacgaatgtagatacttcatccatccgtacggattcta gtttgtttcctcactccgaaagtgatagatcatccaatgaagtatgggatccattgttgaacagtgccagagacatgggt gatactagaagtaaatctgatgcccccattttctgcccaataccaatcaagcccagtgtgcccgggccactgaacgcggc cacagagagcttgatccagttgggagatagggacagtatcaccagtacaaactccacaggctctggtaataccagtgatg gtgcaccgttcgccaaatcatcccgctcagcaagctttgacaacacatctgaaggaaaagatgtagttgatggagaaaca gatgagaagagaaaaaaaggaattttcaaatctttgaaagacagagttagtaaaggaatgaagaaaaaaagtcagaagtt ttcaatggatgaagatggattacaagttggagccctagagagtcagaatagcatagatagtgctaaagaactgaatgaaa gttcagatgacatcttagagaagtacagaaagaaaactgtgtcggatcaagctacagaatcccttgttgtgccgaccatc gacattcccgcaataaaagaaaaaaggttatccataagggatgacgaaatagacggcccacccatatacgatcctaacaa tctagaaaactgctttgccttcacggacacaaaacgaaaattacgaatcgtcatgagtagtccggaattccagataggct acagtcagaccccagatctggccatcggcagcttgggaattcgtagagatttagatacgcataaagacatgagtgtggaa attctcaagttactgaaagcccagcttgctgaggctattaacttacaaaataaggatttgattgcacagttacatgaagc catacgctgtgtcaaaatgtttgattcaaatggttgtaagaagttgataagatctctacatgatgactatcagagcagga cggcatatgtatcgtatttaatacggagtcagcaaggtctacttaccaccagctcattcctacaacgattggtcaacaga gttaaacgagataaagcggtgtgtaacaaccatttaacccaggtgtgtgtgcgactgtatgtagagaggaaggagggaaa tgtaatcaaatttatcacagactttcaaaagcttaccatgccagatgaaaagactgacttgatggagaaagcatcgaatg aggcccagctagaggatgctcagattgccatagaacgttttatcatgagccgtatctacacacacgctatgtttcctaac ggggacggtgatatactgagggaccagttattccatcagcacattaagaagctgagtcagatcatcacaccttcacataa agatttacgtattccgaggatgtaccagtttgaatgtccgtggacggcagctcagaaggaactctatatgatcaatgcat acaagacacctaaagacaaagtcaagtgtgtgactcggtgttcaacaacgattatgaacttactaagcatggctaatgaa cgttcggtaccagctgccgatgatttcttgcctgtcctaatctacgtgataatcaaggccaaccctccctgcatgctctc aaccaatcagtatgtcaacagtttctatggcaacagatttagcggagaagaacagtactggtggattcagttctcctcag cattagaatttattaaaacgatggaatataacacatag |
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| Transcript ID | pfu_aug2.0_3161.1_05770.t2 |
| Definition | - |
>pfu_aug2.0_3161.1_05770.t2 atgaagattcatcgcgtgacatatgttacaattatatcttttatactggtgacatgcagagaagtgggggattgtgaagt gacacaacgtgtcgacaagccagtgagaaccacagggaacattgcaaattcccgtacatatacatccacagtagtatacc gagagcgcaataggcaaagtttgttaaagtcaagacttaaacagattttggaacgaatttattgtgataataagagtaga aattatcgaacatatctgtctggacaatatgatcagtttgaattgaaaaacgattctggattcagagacccatggaacaa tatcgtaaagactaaaagtttttcaaagatgcttgagaggtacaaacgtgacgttcacgaaatgacggacagtgagcctt atgtcatgacaaatacaacaaataggtgtgaaaatgtttcggcagacttcaaagatgacggtatttactgtaacatgact tgggatatgctgtcgtgttggcccgtcactcctgctggaaaatatgcaataatttcctgccctgaaaacttggaacatct tattgatcccacaaaaaatgcaacaaaattctgctacctaaacgggacatgggccagcagagctaattacaacaactgct ttatacaaagccagaagacaaacgaccttgctagcagtgataagtttgaagaaatagatgccatctgtggtgtgatatac attcttggatattctgtctctacagtagcattacttgcagctctcttcatctttatgtatttcagtatgttgttgcttat gacccgtaggtttcacatcaccttgacccaaggagatgagaccaaatccacagtaagtgacacatggagtacagacgtac tagcgagtgactctgagcccccggagaatcagtatgacagattagaggaagtggtcagacagagcctgcttataaaacaa gagcacgtttctgaggtatcagagacagcaagtgatgcttggagtatggacgtattggccagcgatacagaagagaaaca agctctgtccgagtttgatcaggatgatataggtagtgtgacagacctagcatccatgtctggagaccaagcacaggccg atctacctgaaggtagacagagtcccaccgaggaccagcaggatttactcggtgccaccggcatggactccggaccaccg gcaccttacgacaacgaaccgtttatacccagaaccagtgattctagtctacctggcaagtctaaacatccaagaaggcc aggaagaagtattgataatgtttttgctgataacgatgaacctgtgttatcaaccagatcgcaagaaattcagatttctg atgcaaatagactgagtataccggtaaaacaaccgagaccacattctgcagggcggtcagggagtcatggtcgtcacggt ccattgctctcggtccccgaacacagttcaaccgtgacatcttctaagccggtaaatagtagtacagagatactgggacc acctccaccgttacagaacctagaaggaaacaaaccaatgatgtctttcatgccaccgaatataggcaacattcccttaa caagtgatgtatctaaagctggagataattcattgaagaagctggagagttctgatttacaggagcttgagaatttgtcg tttgagaaccctgtgtttaatggaggagcccgaccaaagcagaggtcaagctgtccccagattggtagtcgtgacaaaga ttttataaggaaagaaaatgcaaaagttctcaaatttgcagaacaaaagaaggcacgttctgtgatagaatggacggcat cctgctctacagattccggaataggcggaactccacattcactggaatcccaatccatggattctctactagtccagaat gaccgatcctcacagcaatccatggattcattcgccgaccaatcaggagtcctcaaaatttctgaacaacagaacactaa tttcaatgccaacaggctctcggaagctttatctatgtttgatccgtattcctccgattctcacacgaatgtagatactt catccatccgtacggattctagtttgtttcctcactccgaaagtgatagatcatccaatgaagtatgggatccattgttg aacagtgccagagacatgggtgatactagaagtaaatctgatgcccccattttctgcccaataccaatcaagcccagtgt gcccgggccactgaacgcggccacagagagcttgatccagttgggagatagggacagtatcaccagtacaaactccacag gctctggtaataccagtgatggtgcaccgttcgccaaatcatcccgctcagcaagctttgacaacacatctgaaggaaaa gatgtagttgatggagaaacagatgagaagagaaaaaaaggaattttcaaatctttgaaagacagagttagtaaaggaat gaagaaaaaaagtcagaagttttcaatggatgaagatggattacaagttggagccctagagagtcagaatagcatagata gtgctaaagaactgaatgaaagttcagatgacatcttagagaagtacagaaagaaaactgtgtcggatcaagctacagaa tcccttgttgtgccgaccatcgacattcccgcaataaaagaaaaaaggttatccataagggatgacgaaatagacggccc acccatatacgatcctaacaatctagaaaactgctttgccttcacggacacaaaacgaaaattacgaatcgtcatgagta gtccggaattccagataggctacagtcagaccccagatctggccatcggcagcttgggaattcgtagagatttagatacg cataaagacatgagtgtggaaattctcaagttactgaaagcccagcttgctgaggctattaacttacaaaataaggattt gattgcacagttacatgaagccatacgctgtgtcaaaatgtttgattcaaatggttgtaagaagttgataagatctctac atgatgactatcagagcaggacggcatatgtatcgtatttaatacggagtcagcaaggtctacttaccaccagctcattc ctacaacgattggtcaacagagttaaacgagataaagcggtgtgtaacaaccatttaacccaggtgtgtgtgcgactgta tgtagagaggaaggagggaaatgtaatcaaatttatcacagactttcaaaagcttaccatgccagatgaaaagactgact tgatggagaaagcatcgaatgaggcccagctagaggatgctcagattgccatagaacgttttatcatgagccgtatctac acacacgctatgtttcctaacggggacggtgatatactgagggaccagttattccatcagcacattaagaagctgagtca gatcatcacaccttcacataaagatttacgtattccgaggatgtaccagtttgaatgtccgtggacggcagctcagaagg aactctatatgatcaatgcatacaagacacctaaagacaaagtcaagtgtgtgactcggtgttcaacaacgattatgaac ttactaagcatggctaatgaacgttcggtaccagctgccgatgatttcttgcctgtcctaatctacgtgataatcaaggc caaccctccctgcatgctctcaaccaatcagtatgtcaacagtttctatggcaacagatttagcggagaagaacagtact ggtggattcagttctcctcagcattagaatttattaaaacgatggaatataacacatag |
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Protein
| Protein ID | pfu_aug2.0_3161.1_05770.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3161.1_05770.t1 MKIHRVTYVTIISFILVTCREVGDCEVTQRVDKPVRTTGNIANSRTYTSTVVYRERNRQSLLKSRLKQILERIYCDNKSR NYRTYLSGQYDQFELKNDSGFRDPWNNIVKTKSFSKMLERYKRDVHEMTDSEPYVMTNTTNRCENVSADFKDDGIYCNMT WDMLSCWPVTPAGKYAIISCPENLEHLIDPTKNATKFCYLNGTWASRANYNNCFIQSQKTNDLASSDKFEEIDAICGVIY ILGYSVSTVALLAALFIFMYFSMLLLMTRRFHITLTQGDETKSTVSDTWSTDVLASDSEPPENQYDRLEEVVRQSLLIKQ EHVSEVSETASDAWSMDVLASDTEEKQALSEFDQDDIGSVTDLASMSGDQAQADLPEGRQSPTEDQQDLLGATGMDSGPP APYDNEPFIPRTSDSSLPGKSKHPRRPGRSIDNVFADNDEPVLSTRSQEIQISDANRLSIPVKQPRPHSAGRSGSHGRHG PLLSVPEHSSTVTSSKPVNSSTEILGPPPPLQNLEGNKPMMSFMPPNIGNIPLTSDVSKAGDNSLKKLESSDLQELENLS FENPVFNGGARPKQRSSCPQIGSRDKDFIRKENEQKKARSVIEWTASCSTDSGIGGTPHSLESQSMDSLLVQNDRSSQQS MDSFADQSGVLKISEQQNTNFNANRLSEALSMFDPYSSDSHTNVDTSSIRTDSSLFPHSESDRSSNEVWDPLLNSARDMG DTRSKSDAPIFCPIPIKPSVPGPLNAATESLIQLGDRDSITSTNSTGSGNTSDGAPFAKSSRSASFDNTSEGKDVVDGET DEKRKKGIFKSLKDRVSKGMKKKSQKFSMDEDGLQVGALESQNSIDSAKELNESSDDILEKYRKKTVSDQATESLVVPTI DIPAIKEKRLSIRDDEIDGPPIYDPNNLENCFAFTDTKRKLRIVMSSPEFQIGYSQTPDLAIGSLGIRRDLDTHKDMSVE ILKLLKAQLAEAINLQNKDLIAQLHEAIRCVKMFDSNGCKKLIRSLHDDYQSRTAYVSYLIRSQQGLLTTSSFLQRLVNR VKRDKAVCNNHLTQVCVRLYVERKEGNVIKFITDFQKLTMPDEKTDLMEKASNEAQLEDAQIAIERFIMSRIYTHAMFPN GDGDILRDQLFHQHIKKLSQIITPSHKDLRIPRMYQFECPWTAAQKELYMINAYKTPKDKVKCVTRCSTTIMNLLSMANE RSVPAADDFLPVLIYVIIKANPPCMLSTNQYVNSFYGNRFSGEEQYWWIQFSSALEFIKTMEYNT |
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| Protein ID | pfu_aug2.0_3161.1_05770.t2 |
| Definition | - |
>pfu_aug2.0_3161.1_05770.t2 MKIHRVTYVTIISFILVTCREVGDCEVTQRVDKPVRTTGNIANSRTYTSTVVYRERNRQSLLKSRLKQILERIYCDNKSR NYRTYLSGQYDQFELKNDSGFRDPWNNIVKTKSFSKMLERYKRDVHEMTDSEPYVMTNTTNRCENVSADFKDDGIYCNMT WDMLSCWPVTPAGKYAIISCPENLEHLIDPTKNATKFCYLNGTWASRANYNNCFIQSQKTNDLASSDKFEEIDAICGVIY ILGYSVSTVALLAALFIFMYFSMLLLMTRRFHITLTQGDETKSTVSDTWSTDVLASDSEPPENQYDRLEEVVRQSLLIKQ EHVSEVSETASDAWSMDVLASDTEEKQALSEFDQDDIGSVTDLASMSGDQAQADLPEGRQSPTEDQQDLLGATGMDSGPP APYDNEPFIPRTSDSSLPGKSKHPRRPGRSIDNVFADNDEPVLSTRSQEIQISDANRLSIPVKQPRPHSAGRSGSHGRHG PLLSVPEHSSTVTSSKPVNSSTEILGPPPPLQNLEGNKPMMSFMPPNIGNIPLTSDVSKAGDNSLKKLESSDLQELENLS FENPVFNGGARPKQRSSCPQIGSRDKDFIRKENAKVLKFAEQKKARSVIEWTASCSTDSGIGGTPHSLESQSMDSLLVQN DRSSQQSMDSFADQSGVLKISEQQNTNFNANRLSEALSMFDPYSSDSHTNVDTSSIRTDSSLFPHSESDRSSNEVWDPLL NSARDMGDTRSKSDAPIFCPIPIKPSVPGPLNAATESLIQLGDRDSITSTNSTGSGNTSDGAPFAKSSRSASFDNTSEGK DVVDGETDEKRKKGIFKSLKDRVSKGMKKKSQKFSMDEDGLQVGALESQNSIDSAKELNESSDDILEKYRKKTVSDQATE SLVVPTIDIPAIKEKRLSIRDDEIDGPPIYDPNNLENCFAFTDTKRKLRIVMSSPEFQIGYSQTPDLAIGSLGIRRDLDT HKDMSVEILKLLKAQLAEAINLQNKDLIAQLHEAIRCVKMFDSNGCKKLIRSLHDDYQSRTAYVSYLIRSQQGLLTTSSF LQRLVNRVKRDKAVCNNHLTQVCVRLYVERKEGNVIKFITDFQKLTMPDEKTDLMEKASNEAQLEDAQIAIERFIMSRIY THAMFPNGDGDILRDQLFHQHIKKLSQIITPSHKDLRIPRMYQFECPWTAAQKELYMINAYKTPKDKVKCVTRCSTTIMN LLSMANERSVPAADDFLPVLIYVIIKANPPCMLSTNQYVNSFYGNRFSGEEQYWWIQFSSALEFIKTMEYNT |
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