Gene
| Gene Model ID | pfu_aug2.0_318.1_27218 |
|---|---|
| Locus | scaffold318.1 : 81381 ... 87645 : - |
| To GenomeBrowser | scaffold318.1:81381..87645 |
| Genes list of scaffold | scaffold318.1 |
| Synonym | pfu_aug1.0_67.1_36270 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_318.1_27218.t2 | 1 | 1 | Beta_elim_lyase | 6 | 74 | 1.0e-08 | 34.6 | 2.1e-12 | 1.5e-08 | 34.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_318.1_27218.t2 | gi|524889596|ref|XP_005101353.1| | PREDICTED: uncharacterized protein R102.4-like [Aplysia californica] | 6.0e-31 |
| pfu_aug2.0_318.1_27218.t2 | gi|749744010|ref|XP_011154490.1| | PREDICTED: probable low-specificity L-threonine aldolase 2 isoform X1 [Harpegnathos saltator] | 3.0e-25 |
| pfu_aug2.0_318.1_27218.t2 | gi|749744012|ref|XP_011154491.1| | PREDICTED: probable low-specificity L-threonine aldolase 2 isoform X2 [Harpegnathos saltator] | 3.0e-25 |
| pfu_aug2.0_318.1_27218.t2 | gi|759047296|ref|XP_011332668.1| | PREDICTED: probable low-specificity L-threonine aldolase 2 isoform X2 [Cerapachys biroi] | 4.0e-25 |
| pfu_aug2.0_318.1_27218.t2 | gi|759047294|ref|XP_011332667.1| | PREDICTED: probable low-specificity L-threonine aldolase 2 isoform X1 [Cerapachys biroi] | 5.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_318.1_27218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_318.1_27218.t1 atgctaagaggagcacttcttaaatcatgtacatcttcaatcaggacggtatcagattgtcagcaaagtgttttccccac atcctgtctatctcatgtaacaaatcaaaggcaaaactaccatgatcataaggttgcaagatctgcagagagagaggtgg atcatgtggttgaccttcggagtgacacggtaacaaagccctcctctggtatgagacaagctatggccagtgctgaagtg ggtgatgatgtaatgggtgaagatccaactataaatgctcttcagaagagaatagcagccttgtttggaaaggaatcagc attatttgtaccaacaggaaccatgggaaatctgatttccgtgatgacacattgtaaagagaggggtctggaggccattt taggtcacaaaagccacatatttgtccatgaacaaggcaatattgcacagtttggaggagttttggcatctgttgttgag aataatccagatggcacaatggatatacagagagtaaaggagagaatacgggtatctgaggatccccatttcccttacac acgactcatctgtgtagagaatactcataactactgtggtggcaaagttattcctatatcttttctacaagatatcaaag gactagcagaggagaatggtctgaaggtacacatggatggagccagattaatgcatgcagtaacagcgttagacgtacag ccgccagacatactcaagtacactgattccattaacatgtgcttctctaagctttgttgcattggattatttgtcagtca ttacagaacactttataatgatatggcttttttcagagcacaaagagctaggaaggctttaggtgggggtatgagacagg caggagtattggctgcagcagcaatgtatgccctagattctgtgttgccaaggttacaagaggaccattctagagctcag caagttgtcagagcaatgatgtcaagaaagaatgacttattacatgtagaagtggatggtgtccatacaaacatcgtttt tgtcagtataactaagtcaggcgtgtcagctacggatgtttataacagattgcttcaggtcactgatgaagagagaagcg ctctgggagaaagtattatagtgaagacagtcccatacactgatacgttactcagatttgtacttcacaacgacatatca gccagtgatgccaaaaaggccatagccaaattctgttacgtgattgatgagtacagttcatcataa |
|
| Transcript ID | pfu_aug2.0_318.1_27218.t2 |
| Definition | - |
>pfu_aug2.0_318.1_27218.t2 atggcttttttcagagcacaaagagctaggaaggctttaggtgggggtatgagacaggcaggagtattggctgcagcagc aatgtatgccctagattctgtgttgccaaggttacaagaggaccattctagagctcagcaagttgtcagagcaatgatgt caagaaagaatgacttattacatgtagaagtggatggtgtccatacaaacatcgtttttgtcagtataactaagtcaggc gtgtcagctacggatgtttataacagattgcttcaggtcactgatgaagagagaagcgctctgggagaaagtattatagt gaagacagtcccatacactgatacgttactcagatttgtacttcacaacgacatatcagccagtgatgccaaaaaggcca tagccaaattctgttacgtgattgatgagtacagttcatcataa |
|
Protein
| Protein ID | pfu_aug2.0_318.1_27218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_318.1_27218.t1 MLRGALLKSCTSSIRTVSDCQQSVFPTSCLSHVTNQRQNYHDHKVARSAEREVDHVVDLRSDTVTKPSSGMRQAMASAEV GDDVMGEDPTINALQKRIAALFGKESALFVPTGTMGNLISVMTHCKERGLEAILGHKSHIFVHEQGNIAQFGGVLASVVE NNPDGTMDIQRVKERIRVSEDPHFPYTRLICVENTHNYCGGKVIPISFLQDIKGLAEENGLKVHMDGARLMHAVTALDVQ PPDILKYTDSINMCFSKLCCIGLFVSHYRTLYNDMAFFRAQRARKALGGGMRQAGVLAAAAMYALDSVLPRLQEDHSRAQ QVVRAMMSRKNDLLHVEVDGVHTNIVFVSITKSGVSATDVYNRLLQVTDEERSALGESIIVKTVPYTDTLLRFVLHNDIS ASDAKKAIAKFCYVIDEYSSS |
|
| Protein ID | pfu_aug2.0_318.1_27218.t2 |
| Definition | - |
>pfu_aug2.0_318.1_27218.t2 MAFFRAQRARKALGGGMRQAGVLAAAAMYALDSVLPRLQEDHSRAQQVVRAMMSRKNDLLHVEVDGVHTNIVFVSITKSG VSATDVYNRLLQVTDEERSALGESIIVKTVPYTDTLLRFVLHNDISASDAKKAIAKFCYVIDEYSSS |
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