Gene
| Gene Model ID | pfu_aug2.0_318.1_27219 |
|---|---|
| Locus | scaffold318.1 : 88766 ... 92273 : + |
| To GenomeBrowser | scaffold318.1:88766..92273 |
| Genes list of scaffold | scaffold318.1 |
| Synonym | pfu_aug1.0_67.1_36271 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_318.1_27219.t1 | 1 | 1 | FPL | 47 | 129 | 1.3e-19 | 70.4 | 4.0e-23 | 2.0e-19 | 69.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_318.1_27219.t1 | gi|524895849|ref|XP_005104406.1| | PREDICTED: protein CLEC16A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_318.1_27219.t1 | gi|676487764|ref|XP_009064403.1| | hypothetical protein LOTGIDRAFT_196246, partial [Lottia gigantea] | 4.06377e-44 |
| pfu_aug2.0_318.1_27219.t1 | gi|751211581|ref|XP_011158533.1| | PREDICTED: protein CLEC16A-like [Solenopsis invicta] | 5.00264e-43 |
| pfu_aug2.0_318.1_27219.t1 | gi|736168809|ref|XP_010765214.1| | PREDICTED: protein CLEC16A, partial [Notothenia coriiceps] | 5.99756e-43 |
| pfu_aug2.0_318.1_27219.t1 | gi|260792418|ref|XP_002591212.1| | hypothetical protein BRAFLDRAFT_183809 [Branchiostoma floridae] | 3.00018e-42 |
Transcript
| Transcript ID | pfu_aug2.0_318.1_27219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_318.1_27219.t1 atgattgtcgtgaaaaatattgatgcagctgttgctcagaaagatgcccagaaaaggaagatgttgaggtacttacatgg attgctgtgtaagaatcagaccgtgacagaacataacagaagtttgttggttgaaacactaagatcaatatctgaaatcc taatctggggagatcaaaatgacagtactgtttttgattttttcttggaaaagaacatgttatccttctttctgcgctat ctacaacaaaaatctggacgatatatctgtgtacagcttctacagacgttgaatatcttatttgagaacatcagcaatga aacatctctatcactagaagtgtcaaaatactgttttggtacatgcatttgtgtaaacttcaaatttattttgttgtgca gtaaattaaacttagaaataaccttaatgactaccttctctcaaacaatcacataa |
|
Protein
| Protein ID | pfu_aug2.0_318.1_27219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_318.1_27219.t1 MIVVKNIDAAVAQKDAQKRKMLRYLHGLLCKNQTVTEHNRSLLVETLRSISEILIWGDQNDSTVFDFFLEKNMLSFFLRY LQQKSGRYICVQLLQTLNILFENISNETSLSLEVSKYCFGTCICVNFKFILLCSKLNLEITLMTTFSQTIT |
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