Gene
| Gene Model ID | pfu_aug2.0_3183.1_12400 |
|---|---|
| Locus | scaffold3183.1 : 59026 ... 68663 : + |
| To GenomeBrowser | scaffold3183.1:59026..68663 |
| Genes list of scaffold | scaffold3183.1 |
| Synonym | pfu_aug1.0_12382.1_39323 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3183.1_12400.t1 | 2 | 1 | Ubie_methyltran | 34 | 66 | 6.8e-11 | 41.7 | 4.1 | 2500.0 | -2.7 |
| pfu_aug2.0_3183.1_12400.t1 | 2 | 1 | Methyltransf_31 | 84 | 93 | 7.6e-24 | 84.0 | 4.8 | 3000.0 | -2.3 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | Methyltransf_23 | 146 | 278 | 1.6e-15 | 57.2 | 5.0e-18 | 3.1e-15 | 56.2 |
| pfu_aug2.0_3183.1_12400.t1 | 2 | 1 | Methyltransf_4 | 156 | 223 | 1.0e-06 | 27.9 | 6.3e-09 | 3.9e-06 | 26.0 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | MTS | 164 | 269 | 6.7e-12 | 45.0 | 1.9e-14 | 1.1e-11 | 44.3 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | PrmA | 164 | 268 | 1.5e-07 | 30.8 | 4.0e-10 | 2.5e-07 | 30.1 |
| pfu_aug2.0_3183.1_12400.t1 | 2 | 2 | Methyltransf_31 | 165 | 280 | 7.6e-24 | 84.0 | 2.6e-26 | 1.6e-23 | 82.9 |
| pfu_aug2.0_3183.1_12400.t1 | 2 | 2 | Ubie_methyltran | 165 | 270 | 6.8e-11 | 41.7 | 2.6e-13 | 1.6e-10 | 40.5 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | Methyltransf_18 | 167 | 268 | 2.2e-13 | 50.7 | 7.0e-16 | 4.3e-13 | 49.8 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | Methyltransf_26 | 167 | 271 | 7.0e-08 | 32.5 | 2.0e-10 | 1.2e-07 | 31.7 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | Methyltransf_25 | 168 | 264 | 8.4e-10 | 38.9 | 2.9e-12 | 1.8e-09 | 37.8 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | Methyltransf_12 | 169 | 266 | 1.9e-16 | 60.3 | 5.4e-19 | 3.4e-16 | 59.5 |
| pfu_aug2.0_3183.1_12400.t1 | 1 | 1 | Methyltransf_11 | 170 | 267 | 3.4e-19 | 69.1 | 1.2e-21 | 7.7e-19 | 67.9 |
| pfu_aug2.0_3183.1_12400.t1 | 2 | 2 | Methyltransf_4 | 253 | 267 | 1.0e-06 | 27.9 | 1.9 | 1200.0 | -1.7 |
Transcript
| Transcript ID | pfu_aug2.0_3183.1_12400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3183.1_12400.t1 atggaccgagagagaaataagttacaagacatcgtggataaaagtcttatttcgttaggtattgaagttgggattgctgc tggtatttacaaagcatttgagaaacacaacagaaaatgcacatgtgaagatttggctaaaacagctggattgaatgaaa gatacgtgaaagaatggctgggtggaatggtagctgctgagctgatatatcttaacgaggagtctgaatacatattacct atttcagcggaagctatagaatctcaatgcaaaacctctttgatgagaatattatttggtcattttgagcatgtcataga cgccatgaaaaatattggaaagtcaggatacgaattatacgatatcaaaggtcttgctgagtttatgacaatcgagagac aacgacctgggtctgttttctatatcgacagcaaatttgtgaaagacaacatagcgccagtcgtgaaatgggtgaaagaa gaaaatgatgtgtctattaaaataatggacttcggctgtggaaacggtattgttacaattcagattgcgaagtatttgtc agatgtaaacatcttggggattgacgaaaacagcatgatcatagaacgtgccaagaaatcggcacaggatgaaaacgtcc ccaactgtttattcgaggtgtgtaagggagaggatatgaccgaaatatacgaaggttcctttgacatcgtgttcatgatg gatgtccttcatgatctttcagatcctgatcgtgtaatggcgtccgtcaagaaagtcctcaagcccggaggttacctgat agcgatcgatcctgcaatgcacagcgaccataaggacaatgtcggtaacatagccgttggaggttactatttcgtcagta tgttcgtttgtttaccaagcagtcttactcgagatccaaaggttggacatggcttgggatggggttatgaaaataggaaa tcctacattgagaagtgtggttttcgacttcgtacgcttaccgaggaagaagatatgaatgagatgaaaaatagaatcat tgggaaaatgatgtga |
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Protein
| Protein ID | pfu_aug2.0_3183.1_12400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3183.1_12400.t1 MDRERNKLQDIVDKSLISLGIEVGIAAGIYKAFEKHNRKCTCEDLAKTAGLNERYVKEWLGGMVAAELIYLNEESEYILP ISAEAIESQCKTSLMRILFGHFEHVIDAMKNIGKSGYELYDIKGLAEFMTIERQRPGSVFYIDSKFVKDNIAPVVKWVKE ENDVSIKIMDFGCGNGIVTIQIAKYLSDVNILGIDENSMIIERAKKSAQDENVPNCLFEVCKGEDMTEIYEGSFDIVFMM DVLHDLSDPDRVMASVKKVLKPGGYLIAIDPAMHSDHKDNVGNIAVGGYYFVSMFVCLPSSLTRDPKVGHGLGWGYENRK SYIEKCGFRLRTLTEEEDMNEMKNRIIGKMM |
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