Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3184.1_15731
Locus scaffold3184.1 : 28261 ... 42755 : -
To GenomeBrowser scaffold3184.1:28261..42755
Genes list of scaffold scaffold3184.1
Synonym pfu_aug1.0_11381.1_46372

Manual annotation
Annotation by Blast2GO
Annotation GO
phosphorylase kinase gamma GO:0004683 GO:0005524 GO:0006468

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3184.1_15731.t1 gi|676463410|ref|XP_009056588.1| hypothetical protein LOTGIDRAFT_162384 [Lottia gigantea] 8.0e-16
pfu_aug2.0_3184.1_15731.t1 gi|390347781|ref|XP_003726866.1| 8.0e-14
pfu_aug2.0_3184.1_15731.t1 gi|642917489|ref|XP_008191224.1| PREDICTED: peripheral plasma membrane protein CASK isoform X3 [Tribolium castaneum] 1.0e-11
pfu_aug2.0_3184.1_15731.t1 gi|642917487|ref|XP_008191223.1| PREDICTED: peripheral plasma membrane protein CASK isoform X2 [Tribolium castaneum] 1.0e-11
pfu_aug2.0_3184.1_15731.t1 gi|189235646|ref|XP_968349.2| PREDICTED: peripheral plasma membrane protein CASK isoform X4 [Tribolium castaneum] 1.0e-11

Transcript
Transcript IDpfu_aug2.0_3184.1_15731.t1
Definition-
>pfu_aug2.0_3184.1_15731.t1
atgttagaagtggaccccaatcaacgaatcacaatagagggagttctacaacacccctggattaaggatcgagcaaaaat
tcccaaagtccatctccaggagacagtggaagaattgaagaagtttaatgcaagacggaaactcaagcatcggagttgct
tttgccacagagataattctttaaaaaggttaaaagcagcaaatatgaatcgatgttccattgactttgatggtaatgtc
tatggcaaatcaagacgtacagcagctatgtatgaaatagttagaaatgtcgacaactatccccaatgtgccattggatt
tgattgcaaagaagaatcatacaaaaatctacattgtatgtattctgactattcatctttcatctacccagaagtatgta
gtaggaaatgcacgggaaatactggtacttcaaaaagaactgcaaacacagattttcatatgaaacactcttcaaatcat
cagtcgcaccccgaagctcaatattgtgacataaatgactccatagaaggtttgaaacgggcacaaggggaagaaaatca
cataccatcgggtagaaaatctgctttacaaacaccatgtagaagtgtttacaactcgccttatgatgaacttaatagac
atggaaaatgggctaagtcgcaaaatgaaagttactttacagtgtcagaaaatgaaaacttagaagaaacctatcggtat
gatttaacacgggatgcaggtaatgaacaaagaccacacgacaactattacgatactgctgctaaattggcacagaatac
agacggggcatatgctcattgttatcgaatcaaatctgaagtttaa

Protein
Protein IDpfu_aug2.0_3184.1_15731.t1
Definition-
>pfu_aug2.0_3184.1_15731.t1
MLEVDPNQRITIEGVLQHPWIKDRAKIPKVHLQETVEELKKFNARRKLKHRSCFCHRDNSLKRLKAANMNRCSIDFDGNV
YGKSRRTAAMYEIVRNVDNYPQCAIGFDCKEESYKNLHCMYSDYSSFIYPEVCSRKCTGNTGTSKRTANTDFHMKHSSNH
QSHPEAQYCDINDSIEGLKRAQGEENHIPSGRKSALQTPCRSVYNSPYDELNRHGKWAKSQNESYFTVSENENLEETYRY
DLTRDAGNEQRPHDNYYDTAAKLAQNTDGAYAHCYRIKSEV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495