Gene
| Gene Model ID | pfu_aug2.0_32.1_06782 |
|---|---|
| Locus | scaffold32.1 : 148676 ... 175335 : + |
| To GenomeBrowser | scaffold32.1:148676..175335 |
| Genes list of scaffold | scaffold32.1 |
| Synonym | pfu_aug1.0_457.1_43684 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_32.1_06782.t1 | 4 | 1 | Fasciclin | 39 | 176 | 0.0 | 190.7 | 9.3e-14 | 1.4e-09 | 38.0 |
| pfu_aug2.0_32.1_06782.t1 | 4 | 2 | Fasciclin | 216 | 327 | 0.0 | 190.7 | 6.9e-18 | 1.0e-13 | 51.4 |
| pfu_aug2.0_32.1_06782.t1 | 4 | 3 | Fasciclin | 355 | 474 | 0.0 | 190.7 | 8.9e-19 | 1.3e-14 | 54.2 |
| pfu_aug2.0_32.1_06782.t1 | 4 | 4 | Fasciclin | 651 | 754 | 0.0 | 190.7 | 5.6e-15 | 8.3e-11 | 41.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_32.1_06782.t1 | gi|676496860|ref|XP_009067353.1| | hypothetical protein LOTGIDRAFT_237218 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_32.1_06782.t1 | gi|676493439|ref|XP_009066239.1| | hypothetical protein LOTGIDRAFT_169693 [Lottia gigantea] | 1.0e-16 |
| pfu_aug2.0_32.1_06782.t1 | gi|684398672|ref|XP_009172253.1| | hypothetical protein T265_08242 [Opisthorchis viverrini] | 4.0e-16 |
| pfu_aug2.0_32.1_06782.t1 | gi|339253610|ref|XP_003372028.1| | putative fasciclin domain protein [Trichinella spiralis] | 2.0e-15 |
| pfu_aug2.0_32.1_06782.t1 | gi|328720311|ref|XP_001945542.2| | PREDICTED: fasciclin-1 isoform X3 [Acyrthosiphon pisum] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_32.1_06782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06782.t1 atggcgaggctgataatctgcctaattgtggcagcttattgctttctatctcttaaagtagacggacaaacagtcagtgg caatattatgcaaattcttcaacagaaagtgggatttagtaagtttgctgagatggtacgctcatcaaacatgcagacac ttttcgagtcaacaacaagtgcgaaattcacagtgtttgcctttaacgacacagcatacaacagtatgggattcacggag agacagaaattccagtcaatgacgctgtcagaaaaagctaattatgtaaagttctgtacaatctatggtcagacattaca gacatcgtctatgagtgacaaccagttctttcagagcatggcaagtgacgggaataaaatattcataaatagaagacaaa gaaccaactttaatccctcaggaaattttggtttcacaacgttttatgtaaacggagcagagatactaccggatgctaag gacattgttgccacaaacggtgtaatccatgggttagggcaggtcatatttatctccagcagtaaaggagcactgggtta tgctgaacaacctgaggataccactattcgtacatcgaaattttttgagctgaccaagtctctgacaggtgaattttacg gcacgttggtacagctgagtaacagaaacaatcttgtaactctgatgatccctgatgatgctgccatgaataaaatccct gcagcaaaactagaccaactcaaatctaaccctagggaacttgacagggtcattaggtcacatttcataaaagacagagt ggtgttcacatcgtatgtcaaccataatgagggttttacgagtgcattgggacagcctatgacattccgtaaaccttatc cttggcaagctctggttaatagctttggagtttcagcagagatcaaacgtggaaacataacagtggaaaacggtgtactg cacattgtagaccagctacttggatttgtctataacaatatcagagagcaaatcactgtcgacggaagacagcttgatca gttgatcaatctaggtaatgatgaaatacgacaagctctagtacagggatcgggcgtgaccgtttttataccaatggact ccgcctttgacaggatccgaactctcccctgggtcaaccttaacagcaatcagacacttgtagatcaagttttacgtctc cacattctgcgagccaatcaaccaatagagatttctacaatcatcggaggatatgagagtcgacagtttcgacagacgat gtacaaggattggatgctaaccatctacaatgaaagaaacgagagttgggtgcagggaggctttgtaaaggcacgcgtga tcagaccagacattaagaccactaacggtatggtacatataatagactccgtactgggaataccgtatctggatatggcc atgcttatctgtcatgatctgtggttactgagaacttatgactatctgagatccataggaatcaagaagtacataacaga tagaagattcacgtcccaagtttgtgactttgaagtttacggctatccaccgaattatgactctggaaatggataccaga actcgcaatcgtcatgtccttcaaactgtcagacgtatccaaactatctgagttttccatgtaactcacctccatgtaac ggtcagtcaatgttgagttgtccgaccgagtgccagcagtctcaatatcagatgacctatccatgtacggacatgatgtg tacaggggggacaggaggcaacacaggaagtcagagctcatgtcccagttactgtactaacccggcctaccagacctacc cacaatgtcagcagtatccgtgtgtgtcgtcagggggtgggttgaacccgtcgggtcaggctaccacacagtatgacatg ggatactgtggtccagcccaatctccgtgctctatcactttctttgtgccaaactccagtgctattgactactttcagct acgtaacgaggggcagagaatcatgagggatacaccaagatttcaattcctgatgaaaaggctgatgtttaatgatttga tttatgtgagcagacttaatgatggtagtcacaccttcaaagccattaacggagaaagtgtgaggctcactaagacgaac cagagagatgtgaggatttatttttcgggagcatcggcaaatgtgattcacatggatgaaggcgctacaaacggggtgat gcatatcatagacaatattttatttgtgaacgaagaccttacgcgggatatttctggtagctatcatattatgggaaata caatccttgttctcatttgtattttaactttaatgacgatgaaattccgaagttaa |
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Protein
| Protein ID | pfu_aug2.0_32.1_06782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06782.t1 MARLIICLIVAAYCFLSLKVDGQTVSGNIMQILQQKVGFSKFAEMVRSSNMQTLFESTTSAKFTVFAFNDTAYNSMGFTE RQKFQSMTLSEKANYVKFCTIYGQTLQTSSMSDNQFFQSMASDGNKIFINRRQRTNFNPSGNFGFTTFYVNGAEILPDAK DIVATNGVIHGLGQVIFISSSKGALGYAEQPEDTTIRTSKFFELTKSLTGEFYGTLVQLSNRNNLVTLMIPDDAAMNKIP AAKLDQLKSNPRELDRVIRSHFIKDRVVFTSYVNHNEGFTSALGQPMTFRKPYPWQALVNSFGVSAEIKRGNITVENGVL HIVDQLLGFVYNNIREQITVDGRQLDQLINLGNDEIRQALVQGSGVTVFIPMDSAFDRIRTLPWVNLNSNQTLVDQVLRL HILRANQPIEISTIIGGYESRQFRQTMYKDWMLTIYNERNESWVQGGFVKARVIRPDIKTTNGMVHIIDSVLGIPYLDMA MLICHDLWLLRTYDYLRSIGIKKYITDRRFTSQVCDFEVYGYPPNYDSGNGYQNSQSSCPSNCQTYPNYLSFPCNSPPCN GQSMLSCPTECQQSQYQMTYPCTDMMCTGGTGGNTGSQSSCPSYCTNPAYQTYPQCQQYPCVSSGGGLNPSGQATTQYDM GYCGPAQSPCSITFFVPNSSAIDYFQLRNEGQRIMRDTPRFQFLMKRLMFNDLIYVSRLNDGSHTFKAINGESVRLTKTN QRDVRIYFSGASANVIHMDEGATNGVMHIIDNILFVNEDLTRDISGSYHIMGNTILVLICILTLMTMKFRS |
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