Gene
| Gene Model ID | pfu_aug2.0_32.1_06786 |
|---|---|
| Locus | scaffold32.1 : 241286 ... 254081 : - |
| To GenomeBrowser | scaffold32.1:241286..254081 |
| Genes list of scaffold | scaffold32.1 |
| Synonym | pfu_aug1.0_25953.1_69742 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel subfamily c member 4 | GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_32.1_06786.t1 | 1 | 1 | BTB_2 | 4 | 95 | 1.0e-23 | 83.3 | 9.3e-27 | 2.3e-23 | 82.2 |
| pfu_aug2.0_32.1_06786.t1 | 3 | 1 | Ion_trans | 206 | 360 | 4.0e-14 | 52.3 | 1.6e-17 | 4.0e-14 | 52.3 |
| pfu_aug2.0_32.1_06786.t1 | 3 | 2 | Ion_trans | 413 | 421 | 4.0e-14 | 52.3 | 1.3 | 3200.0 | -2.9 |
| pfu_aug2.0_32.1_06786.t1 | 3 | 3 | Ion_trans | 469 | 492 | 4.0e-14 | 52.3 | 0.39 | 960.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_32.1_06786.t1 | gi|676437824|ref|XP_009048329.1| | hypothetical protein LOTGIDRAFT_172897 [Lottia gigantea] | 2.00386e-43 |
| pfu_aug2.0_32.1_06786.t1 | gi|115660720|ref|XP_789154.2| | 1.99965e-42 | |
| pfu_aug2.0_32.1_06786.t1 | gi|676448246|ref|XP_009051671.1| | hypothetical protein LOTGIDRAFT_103410 [Lottia gigantea] | 3.99931e-42 |
| pfu_aug2.0_32.1_06786.t1 | gi|676424568|ref|XP_009044247.1| | hypothetical protein LOTGIDRAFT_103377 [Lottia gigantea] | 6.00036e-42 |
| pfu_aug2.0_32.1_06786.t1 | gi|742229635|ref|XP_010900721.1| | PREDICTED: potassium voltage-gated channel subfamily C member 4 [Esox lucius] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug2.0_32.1_06786.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06786.t1 atggggaaaataaggctaaatgtcgggggtacttatttcgagacaacttcagacaccttgttagagcgaccagacaccaa actcggtgctttggtgaagaaaaacaaaaatgagggttcggtcgaccatctagatctattctttgataggaatccagaga tttttaatttcatcttggacatctatcgcaccgggcagcttcatctgccaaccaatatttgtggagcgactataagaaat gaattggaattctgggaaataccacgtgacctgatagaacgctgttgcttgcagacttattataaatatgacaatgaaac tgaaattcttgtggagatagaagaaacacttaaagccaccgagataccagaggcagacggcagctgtaccttaagaaaat gctggctgagattcttgttagaccctagatcatcaaaggcagctgcggcaagtattttaacgaatgaaatcactggtaac atatattatttgtttagcctacaatcagaccataataatttgagtcagatgtcagacaggaaagagcaaaatggtgacgg cttgtacaccagatcacaccttacagaaatgtctcaaccccacccagtgatacgtatcatcgatttagcctgtttggtat tcttttcggcggagtgtcttcttcgattttttctgtacgagtccaagagggcattttttcaagggaagctcaacaaagca gacatggtggccattgcggccggatggataaattttggtcttgaccttacccgctcacactggcaagataatcactacgt ttttatcctcactcgaattttgtcactgatgcgtatactgcgaatttttcgatttttcaaattctttttaaagtttgctg catttcgcgtcatcctcctaactctgagctctagtttcaaacagctttgtatgactttggtattctccactctcgccttg gttttctttgccattacaactttctacgccgaattggaagggaaggatgaaggaactggaaatgaaattacaaacgcttt tgaggcaatttggtgggcactggttaccatgacaacggttagtatctctgctggtgaattgtttagtccccgagggtatc gttcgcctagtttcacagtgtcacgacacctaaaactcagagatacccttcctgatggcatagctctgtccttatcagtg gatgtatgtagtagcagcacagaatgcggatccagaaaggcgacctacttcagggatttttggggtcatatattcatcca ttatacatacgaatcgttgatctgtagccacggttgctgtggatccgccactgataggcattgctgctcccccacagaga accatataggtgctatcgtggggggttccataggtggcgcttttgctttattcctgatgctggcaattaccatttttcta tgcaagtattacaacatgaagaaaaatcggacaaatccaggcaacacggacaattctataggaacgctttcataccgtac cgtccattataatgccagaaaacaagctttacatctacacggattcagaaacgagccgccacctgagtatcaaccgagtg cctcagcaccatctacgtcagagttacctcctccttatatgtag |
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Protein
| Protein ID | pfu_aug2.0_32.1_06786.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06786.t1 MGKIRLNVGGTYFETTSDTLLERPDTKLGALVKKNKNEGSVDHLDLFFDRNPEIFNFILDIYRTGQLHLPTNICGATIRN ELEFWEIPRDLIERCCLQTYYKYDNETEILVEIEETLKATEIPEADGSCTLRKCWLRFLLDPRSSKAAAASILTNEITGN IYYLFSLQSDHNNLSQMSDRKEQNGDGLYTRSHLTEMSQPHPVIRIIDLACLVFFSAECLLRFFLYESKRAFFQGKLNKA DMVAIAAGWINFGLDLTRSHWQDNHYVFILTRILSLMRILRIFRFFKFFLKFAAFRVILLTLSSSFKQLCMTLVFSTLAL VFFAITTFYAELEGKDEGTGNEITNAFEAIWWALVTMTTVSISAGELFSPRGYRSPSFTVSRHLKLRDTLPDGIALSLSV DVCSSSTECGSRKATYFRDFWGHIFIHYTYESLICSHGCCGSATDRHCCSPTENHIGAIVGGSIGGAFALFLMLAITIFL CKYYNMKKNRTNPGNTDNSIGTLSYRTVHYNARKQALHLHGFRNEPPPEYQPSASAPSTSELPPPYM |
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