Gene
| Gene Model ID | pfu_aug2.0_32.1_06794 |
|---|---|
| Locus | scaffold32.1 : 370747 ... 379943 : + |
| To GenomeBrowser | scaffold32.1:370747..379943 |
| Genes list of scaffold | scaffold32.1 |
| Synonym | pfu_aug1.0_4402.1_08888 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| heparan sulfate glucosamine 3-o-sulfotransferase 5 | GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_32.1_06794.t1 | 1 | 1 | Sulfotransfer_1 | 92 | 213 | 1.8e-15 | 56.9 | 3.6e-19 | 2.6e-15 | 56.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_32.1_06794.t1 | gi|676458135|ref|XP_009054877.1| | hypothetical protein LOTGIDRAFT_118213 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_32.1_06794.t1 | gi|700377317|ref|XP_009943161.1| | PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5 [Opisthocomus hoazin] | 8.96831e-44 |
| pfu_aug2.0_32.1_06794.t1 | gi|734634765|ref|XP_010745934.1| | PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5 [Larimichthys crocea] | 3.9937e-43 |
| pfu_aug2.0_32.1_06794.t1 | gi|432947247|ref|XP_004083963.1| | PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5 [Oryzias latipes] | 8.99634e-43 |
Transcript
| Transcript ID | pfu_aug2.0_32.1_06794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06794.t1 atgtccgtgaagtactctcccgtacccacaaatgacgtaggagagctaccccaaggatggtgtaggagccaactccaccc aaattgcactaagaggaatattattgctttagtggtcattctttccttgtcatctgtgttcattatatccgcctgtgtgg gaacatcttggatacagaactcgcatttttgtcccgagaagcctaaagttattccactaccccattcacgtaagaaggga cttccccactacccacatacacaacgccgcctcccagactgtataatcataggtgtgcgtaaagggggtacccgggctct cattaattacctcaatctacatccggacatagtcacagcaccagaagaaattcattttttcgacgaccagcagaattaca gcaagggtctgagttggtaccgtagacagatgccttacaccttcagtgataaggttatcatagaaaagacgcctaactac tttgtagatgacaaggtaccttggcgaatccataattttagttcctctgtcaagctcattttgattgtccgtgacccgtt gtacagggcagtttctgattacacccaaatccgtgagaggcggttggggcaggggctcgagatggaggaatttgaagaat tggcattcaatggggaggaggagtgtcttattttacctcctgaaagaggcacattccgtctgattttactgtgcgtgaca tcaaaggatgtaatgaccttgacccaatgtaatgtgatcaaggtcagtagtaattga |
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Protein
| Protein ID | pfu_aug2.0_32.1_06794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06794.t1 MSVKYSPVPTNDVGELPQGWCRSQLHPNCTKRNIIALVVILSLSSVFIISACVGTSWIQNSHFCPEKPKVIPLPHSRKKG LPHYPHTQRRLPDCIIIGVRKGGTRALINYLNLHPDIVTAPEEIHFFDDQQNYSKGLSWYRRQMPYTFSDKVIIEKTPNY FVDDKVPWRIHNFSSSVKLILIVRDPLYRAVSDYTQIRERRLGQGLEMEEFEELAFNGEEECLILPPERGTFRLILLCVT SKDVMTLTQCNVIKVSSN |
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