Gene
| Gene Model ID | pfu_aug2.0_32.1_06799 |
|---|---|
| Locus | scaffold32.1 : 517908 ... 533235 : + |
| To GenomeBrowser | scaffold32.1:517908..533235 |
| Genes list of scaffold | scaffold32.1 |
| Synonym | pfu_aug1.0_1706.1_08073 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_32.1_06799.t1 | 3 | 1 | AAA_11 | 203 | 279 | 9.8e-32 | 110.4 | 1.3 | 1400.0 | -1.5 |
| pfu_aug2.0_32.1_06799.t1 | 3 | 2 | AAA_11 | 364 | 586 | 9.8e-32 | 110.4 | 4.4e-34 | 4.6e-31 | 108.1 |
| pfu_aug2.0_32.1_06799.t1 | 1 | 1 | AAA_19 | 369 | 432 | 1.3e-08 | 34.4 | 2.3e-11 | 2.4e-08 | 33.5 |
| pfu_aug2.0_32.1_06799.t1 | 1 | 1 | AAA_12 | 594 | 728 | 1.6e-19 | 70.0 | 3.7e-22 | 3.9e-19 | 68.8 |
| pfu_aug2.0_32.1_06799.t1 | 3 | 3 | AAA_11 | 665 | 708 | 9.8e-32 | 110.4 | 1.7 | 1700.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_32.1_06799.t1 | gi|585677926|ref|XP_006819233.1| | PREDICTED: helicase with zinc finger domain 2-like, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_32.1_06799.t1 | gi|390350102|ref|XP_788705.3| | 0.0 | |
| pfu_aug2.0_32.1_06799.t1 | gi|699667355|ref|XP_009899892.1| | PREDICTED: helicase with zinc finger domain 2 [Picoides pubescens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_32.1_06799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06799.t1 atggaggcgacaggccgcatacaactgacacaacttttccaagccaatgattctgaaaatgatgaggaggaagagcaaga accgatatctatgtttgacttttctaagtcatattacgacaatgaggaggatcagcgcgataaggacgtatttttagata tcatcttacgatccggtctagagttagatgaaagtgatgaaacagtcaaaaaagcaaatttatcatacaaacaaccagta gtatacccagacttgaaggaaaagtccgtattgaacctagaaatggaggcaaacccagaaaaatatgtcagaggaattat taggattgaagatggaaatttggcattttgcgaacctttagatggtggggatgatattattatagaaggtcgttccagcg ctggacaaacattctctgatgacgaagttatagttgaaatcataaaggaagataacacaaagggtaagaaaaaagaaagc aatgtagaaggtttgacaaccgactattcgaacatagaagggaaacagcgccatgagaaagataatgatttgcttcgaat ggaacggtcatgtcgatacggtcacgtggtgagccttgaatcacgaacgagatttcatgatataaaacatccagtttttc tctgtactatggcaatgcatggcaatatgatgaacccaatgtgtaaaacggtaccaaaagtttatataatgaaaacaaac gtagaacgaagaagtgggacagacgtttatcaatatcagagcaagcgtaaaagtctgagagtgcattactgtaaagagtt ttcacggaaagagatactgcaaaatatatttgtggtggttgtattgaactgggataaaagaaggcaatatccaataggag tggtgattgatgtccttgagtttggaaaggacgagaaaagttaccagaagctgactgacagattgcatggagtcccaacg atctattcaaaggatgcaatagaggaaacagaaaacatgatgaaaaagcctgacgatggacataaaggtttccacatggc agccacatatactggaaccgatgttcccctatcaaattttgccagaaacaacgaggaccaagatcgagccatacaaatgg ctttgacaaatagcttcagcttgattcaaggtcccccagggactggtaaaacagttactggagttaaacttctttatctt cttcatcgtctcaatagaagtgtgttcccggacaggcggcaaatagtattttgtggaccgtcaaataaatcaatcgacaa tgttgcaagtattttgcttgagcgcccaatcgttgaatcggaaagatggaaagaacttaagattattcggctttatggaa aatcttttgtatatcaggattttccaatacctgatcaattcaactttttaacgcccggaaaaatcatgaaaaagacagat gtcacattgaaaaactcgagggtagttttacatcatgttatacgggaatgcggaaaacaatatgcagagagactgagagc ttttgacgatagatttataagatcacccggcgaagtctctgcaagcgagttcctagaatacgaagatatccatagcagag ccgagcaggctgaactgaaagaatatgacatcattttctgtactgtgtctatgacaagtaatccaaagttgataaaagct acaaaggggcggattcagcaatgtattatcgatgaatgtggaatgtgtacagaacctgagactttagtaccaatgattgc cctacaaccagagcaagtcaatccaagcatatgcaaatttccatctgatgccttttacgagggaagactgaaaacggata atggaaacaggacaagttgggaggtcacatctccgctcagcatctggaaaaatagtcatagtgcgaaacatcacgtgcct ctcgccttcttccacgtggaaggaatagaggacacaatggtgatatctacccacaaaggaaatgaacaatcaaagagtaa caaagccgaaatagaatttgtgatgaagattatcgagtattttcgtcgtcaaaaagtttcattggataaaataaacgtaa tgtcgcagtacaatgcccaatgttcaatactgcgagatgaaatacaaaaaaagaatctacccaatctccaagtcaatact gtggtgtccagtcaaggtaaccaacatctattaaaagcagatcggacttggagtaatctgatcaacttttacagggagaa gggctgtgtgtatgagaatgactctatactcaatcaataa |
|
Protein
| Protein ID | pfu_aug2.0_32.1_06799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06799.t1 MEATGRIQLTQLFQANDSENDEEEEQEPISMFDFSKSYYDNEEDQRDKDVFLDIILRSGLELDESDETVKKANLSYKQPV VYPDLKEKSVLNLEMEANPEKYVRGIIRIEDGNLAFCEPLDGGDDIIIEGRSSAGQTFSDDEVIVEIIKEDNTKGKKKES NVEGLTTDYSNIEGKQRHEKDNDLLRMERSCRYGHVVSLESRTRFHDIKHPVFLCTMAMHGNMMNPMCKTVPKVYIMKTN VERRSGTDVYQYQSKRKSLRVHYCKEFSRKEILQNIFVVVVLNWDKRRQYPIGVVIDVLEFGKDEKSYQKLTDRLHGVPT IYSKDAIEETENMMKKPDDGHKGFHMAATYTGTDVPLSNFARNNEDQDRAIQMALTNSFSLIQGPPGTGKTVTGVKLLYL LHRLNRSVFPDRRQIVFCGPSNKSIDNVASILLERPIVESERWKELKIIRLYGKSFVYQDFPIPDQFNFLTPGKIMKKTD VTLKNSRVVLHHVIRECGKQYAERLRAFDDRFIRSPGEVSASEFLEYEDIHSRAEQAELKEYDIIFCTVSMTSNPKLIKA TKGRIQQCIIDECGMCTEPETLVPMIALQPEQVNPSICKFPSDAFYEGRLKTDNGNRTSWEVTSPLSIWKNSHSAKHHVP LAFFHVEGIEDTMVISTHKGNEQSKSNKAEIEFVMKIIEYFRRQKVSLDKINVMSQYNAQCSILRDEIQKKNLPNLQVNT VVSSQGNQHLLKADRTWSNLINFYREKGCVYENDSILNQ |
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