Gene
| Gene Model ID | pfu_aug2.0_320.1_00595 |
|---|---|
| Locus | scaffold320.1 : 29816 ... 34050 : + |
| To GenomeBrowser | scaffold320.1:29816..34050 |
| Genes list of scaffold | scaffold320.1 |
| Synonym | pfu_aug1.0_3293.1_23287 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| s-adenosylmethionine synthase isoform type-2-like | GO:0004478 GO:0005524 GO:0005829 GO:0006556 GO:0006730 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_320.1_00595.t1 | 1 | 1 | S-AdoMet_synt_N | 1 | 52 | 2.0e-14 | 53.6 | 1.9e-18 | 2.8e-14 | 53.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_320.1_00595.t1 | gi|41054081|ref|NP_956165.1| | S-adenosylmethionine synthase isoform type-1 [Danio rerio] | 1.0e-39 |
| pfu_aug2.0_320.1_00595.t1 | gi|527243447|ref|XP_005140077.1| | PREDICTED: S-adenosylmethionine synthase isoform type-2-like, partial [Melopsittacus undulatus] | 2.0e-39 |
| pfu_aug2.0_320.1_00595.t1 | gi|675403395|ref|XP_008917936.1| | PREDICTED: S-adenosylmethionine synthase isoform type-2 [Manacus vitellinus] | 2.0e-39 |
| pfu_aug2.0_320.1_00595.t1 | gi|597751870|ref|XP_007237810.1| | PREDICTED: S-adenosylmethionine synthase isoform type-1-like [Astyanax mexicanus] | 2.0e-39 |
| pfu_aug2.0_320.1_00595.t1 | gi|726995626|ref|XP_010388178.1| | PREDICTED: S-adenosylmethionine synthase isoform type-2-like [Corvus cornix cornix] | 6.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_320.1_00595.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_320.1_00595.t1 atgattttagtgtgtggagagatcacatcacaagctaatgtagactatcagaacgtcatccgtaacactatcaaacagat cggttacgacgattctgcaaaaggatttgattacaaaacctgtaatgtgcttgtggcactagaacaacagagtcctgata ttgcccagggtgtgcacgtagacagacacgaagatgacattggtgcaggagatcaggatttagtcatttcctcaacttta ccagaatttgattatactgtacctaacacaattgttatccaaaatttgggccgatag |
|
Protein
| Protein ID | pfu_aug2.0_320.1_00595.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_320.1_00595.t1 MILVCGEITSQANVDYQNVIRNTIKQIGYDDSAKGFDYKTCNVLVALEQQSPDIAQGVHVDRHEDDIGAGDQDLVISSTL PEFDYTVPNTIVIQNLGR |
|