Gene
| Gene Model ID | pfu_aug2.0_320.1_00600 |
|---|---|
| Locus | scaffold320.1 : 96509 ... 133445 : - |
| To GenomeBrowser | scaffold320.1:96509..133445 |
| Genes list of scaffold | scaffold320.1 |
| Synonym | pfu_aug1.0_8767.1_60497 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_320.1_00600.t1 | 1 | 1 | DUF2439 | 5 | 73 | 5.3e-16 | 58.5 | 2.3e-18 | 3.4e-15 | 56.0 |
| pfu_aug2.0_320.1_00600.t1 | 6 | 1 | AAA_11 | 145 | 190 | 1.9e-32 | 112.7 | 4.2 | 6300.0 | -3.6 |
| pfu_aug2.0_320.1_00600.t1 | 4 | 1 | Viral_helicase1 | 176 | 226 | 2.9e-09 | 36.7 | 2.4 | 3500.0 | -2.8 |
| pfu_aug2.0_320.1_00600.t1 | 6 | 2 | AAA_11 | 327 | 402 | 1.9e-32 | 112.7 | 3.4 | 5000.0 | -3.3 |
| pfu_aug2.0_320.1_00600.t1 | 6 | 3 | AAA_11 | 712 | 712 | 1.9e-32 | 112.7 | 7.6 | 11000.0 | -4.4 |
| pfu_aug2.0_320.1_00600.t1 | 1 | 1 | zf-GRF | 1650 | 1693 | 1.4e-14 | 53.6 | 2.5e-17 | 3.7e-14 | 52.3 |
| pfu_aug2.0_320.1_00600.t1 | 6 | 4 | AAA_11 | 1913 | 2041 | 1.9e-32 | 112.7 | 9.2e-10 | 1.4e-06 | 28.1 |
| pfu_aug2.0_320.1_00600.t1 | 2 | 1 | AAA_30 | 1913 | 1958 | 8.6e-07 | 28.7 | 0.0033 | 4.9 | 6.6 |
| pfu_aug2.0_320.1_00600.t1 | 2 | 1 | AAA_19 | 1937 | 1998 | 2.5e-06 | 27.1 | 5.6e-05 | 0.083 | 12.6 |
| pfu_aug2.0_320.1_00600.t1 | 4 | 2 | Viral_helicase1 | 1941 | 1957 | 2.9e-09 | 36.7 | 0.023 | 34.0 | 3.8 |
| pfu_aug2.0_320.1_00600.t1 | 6 | 5 | AAA_11 | 2094 | 2287 | 1.9e-32 | 112.7 | 1.1e-28 | 1.6e-25 | 90.0 |
| pfu_aug2.0_320.1_00600.t1 | 2 | 2 | AAA_30 | 2094 | 2288 | 8.6e-07 | 28.7 | 1.1e-06 | 0.0016 | 18.0 |
| pfu_aug2.0_320.1_00600.t1 | 2 | 2 | AAA_19 | 2118 | 2179 | 2.5e-06 | 27.1 | 0.00012 | 0.18 | 11.5 |
| pfu_aug2.0_320.1_00600.t1 | 4 | 3 | Viral_helicase1 | 2122 | 2138 | 2.9e-09 | 36.7 | 0.022 | 33.0 | 3.8 |
| pfu_aug2.0_320.1_00600.t1 | 4 | 4 | Viral_helicase1 | 2229 | 2438 | 2.9e-09 | 36.7 | 7.6e-09 | 1.1e-05 | 25.0 |
| pfu_aug2.0_320.1_00600.t1 | 1 | 1 | AAA_12 | 2311 | 2441 | 2.4e-35 | 121.7 | 5.5e-38 | 8.1e-35 | 120.0 |
| pfu_aug2.0_320.1_00600.t1 | 6 | 6 | AAA_11 | 2420 | 2512 | 1.9e-32 | 112.7 | 2.7 | 3900.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_320.1_00600.t1 | gi|602665490|ref|XP_007438330.1| | PREDICTED: uncharacterized protein C4orf21 homolog [Python bivittatus] | 0.0 |
| pfu_aug2.0_320.1_00600.t1 | gi|731479032|ref|XP_010588813.1| | PREDICTED: protein ZGRF1 isoform X3 [Loxodonta africana] | 0.0 |
| pfu_aug2.0_320.1_00600.t1 | gi|731479030|ref|XP_010588812.1| | PREDICTED: protein ZGRF1 isoform X2 [Loxodonta africana] | 0.0 |
| pfu_aug2.0_320.1_00600.t1 | gi|755504482|ref|XP_011238536.1| | PREDICTED: protein ZGRF1 isoform X6 [Mus musculus] | 0.0 |
| pfu_aug2.0_320.1_00600.t1 | gi|585642054|ref|XP_006881207.1| | PREDICTED: uncharacterized protein C4orf21 homolog [Elephantulus edwardii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_320.1_00600.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_320.1_00600.t1 atggctgaaagacagttcattgtgttgtacactcatcaaaagaccaaaaaggcaaagacttggcaagatggagtccttaa gatgccttcggctggatcaaagggagtcctctttgatgacaaagggatgaagatagattccatccatgtgagaccacagg accttactccaggggaacaactagagagtgatagacattatataatgatagaggaggagaaggctattagtagcactgga atgggggaggtgaggacctctgaggcagctgtcaatcagagcagggctccaactctacctccacctcaaacacgccctca aaatgctgttagagtggggttgaagaggaaaagaactggattcaatcctccaaggatggtacgacctgtagaaaatagct cagatggaactcctgatgtaagacctcaaagagaagcacatgaagacctttctttactaaatcagactcattccttttca agaaacgatcagagttcatttcatctcagattcaagcagctgcaaacaaatcaatcaaatacttttcaacaaaattcatc agaaactaaatcatcatttcatcccacagaatcaggccatgattttgagtcaacctcttcaaataattcatcggcatcac cattttcaaaatactataggaattcttctgccactctaaattcagattcatctttcatgaagaatgatggcttgtcaagt cctcagcaaaagatcccctcaccatggagtacgtatggaaggaatggtctgaataagaggaacagtcctgtgattggtaa agtatatgtgtcgaagaatgaagatgggactttctcatctgaagatccattacaagaatcatctcttaatcttgctgttt ttcgtggcactgtgactggaaagagtaattttgataaaggattagctagtgaaaagaacgacgttgctaatgaatctgtt gcgaaaagtgagacttctgctaaaaggaacgcagctcagatcttggcacttatgggaaacagaaatgctgcagtagggac tatgctagattctgtaagaccacagtcatttgaacaatgtttgaagaaatctgataaaactatctataatgattcatcaa agtatcaagatagtttaaatgtaagttacaattgggtagaaacaccaacaggaagtcaattcaggtcagaagaacagagt acaaattcagatggttttcagactttgcagtgtaagtaccagaaagaatcttggacactgaataatgagactgagggaat agatggtagagcttgtactcaaaatgagaaccagaatctttcggatgcaagtttgccagcacaaaatgaatgccgttctt ttgtagaaaataccaatggcactcatgtagatgatgaagaaaatgaagatgaagatgaagatgaagatgaatcagaggaa gatatggcaggtattgatacagcacaacccgacttccacattagtttttcacctctttctcagttttcaaatgacttaga agacagtgaagataacgttatagagaagactgaaagtcaaaatgatgagtcaaattgcacagggacaatatcttccacac tcaaattatgtaataatgatgctaactcagactccagaattccagaaagtgaacaggatgttgaaatgaaaggctctcca gaggacttgccagacagtactgagcagttacatgtagtggaatcaaaagtaaatgataaatgtgtgttgaacagaacaga aaattcagaaaatgattcatcactcaatgggaaagttgtaatcgataagagtttatttgatgctggtggaagttcaacag ataaatgtgaaatgaaaacattatcatcttgtgagaataaagaaggagctcaagatgatacaaatgagccattggctcaa gaagagcctaaaggtgaggatgctacaaaagaggaggaggtgcaagttatgactgaagaagattgcagtgatcatactga ggagcaagcttttcagagacatgtagatagcaaggaaggtgcaatggaggagccacaatttcaagaagatggcaaggtag atttttctgaggagcaaaattttcaagaagatggcatggtagatttttctgaggagcaaaattttcaagaaaatggcatg gaaagtttaaccaaggagactcatcttgaagatgatgctatggtttatgatgtaatcaatgaacaactgatttcagaaga tgacatggaaaaaagtagtgcaaatgagcagctgattcatggaattagtaaagacagacatattacaaaaaatgagtttc aaaaacaggaaggaaagactaatcattcaataggatcatctaaagctgattctcaaggcagttttcatgtgatgagtagt gaaggaaacttgaacaaacttgacttcagccaagattctatggccaacttttcacttttttctagtgaggagttcaaacc ttgtgcacaaaaatattctaccgctggcaacaaggaaagcagaagccaagattctatggccaacttttcactgttttcta gtgaggagttcaaaccttgtgcacaagaatattctaccgctggcagcaaggaaagcagaaggtccaattctttgcccttt agtgatgtagaatgtgtggggtcatgtcctctcagccatgaatctaaggatgatggagcatgtggtaatgatacttcaaa tccagaacaaagtatggaagggaattatgagaattttcattctgtagacgaagcgacaaatgctcaaaatgaggaagaat tatttgttccaagtgatgagcatgctcttacagagatagaaaataaaacatcggaggaagaacaaggaataggcaatagt aactgtagtttatcacaggatgtggatggaactccagcttctgtacatgctggatcttcattttcagaagagaggcaaga agtaggtcatgaaaactcttacctgtcacaggatgtgaatgcaatttcatcatctgttgaaacaactgaatcattcaaaa actcacccatctgtgagaattcatcagattttgtcaaagctaatcgtgatgattcagacattttgccgtgcaatttagat aaaaggcaggaagtttcaaaatcatccagtatagtgattgaggacaattactcagattttagggaagaacaacttgcagc tgagcccaaaaattttccacatgttgaaagaactaaaacaaggatgaaggaaggataccttgatttaaggcaagaacacc acagggttgaaccaggatgtcttccttgtgtagatgcaggtaaagcaagtacagagcttgtccaccaaagctgtgtgaga gatgaactgaatttatgtcagacgcttgaaaatccatcaaagtttgaaaatctgaccaatcccaggacaacttttgttaa aagagaaaccactcctcaaggtttagttgacaagctatctgagaagctaacttcatacaagatgaaaggaagtctgagtg gagtgggagccaagagacagtcaaaggattggagaaatgtatctttgtgtaacagtttaaattctacactagaggaacag tttttcccagccatggacaggtcacttgtgtgtaatatgaaaggtatgcataacatgaatagattgaattgtgacagtgg tttgaattcaaagtggggaaaattcatacaagaagaggaaagtgatgaacttgattctctattgaattgttcctttgatt taaagaccagtcctaattataaaattccaaatagttcccatggattaagaactatctcaaatgatgtatttagccataat tctgatggaatatctttgcagcatgataaccatggaactttgaattcagtgcccaaagaggcaactaagacaaacataga tgcatctaactgtaaagtggatagcagaaggtttaaagaccagaactcaaggtctcagcatttcagacaggaagaggcag gtgagaattttgccatagacgacagtaaagacaaaagctggatctcaagacttcaaggatatgagaatagtaattcaaaa agaatctctcctaactttgatgtaaatgctagtccagaacttaattttccgagcacattaccgaaatggcatcaaactaa tttcacatcttataatcaatccccagatgtagtgcctaaattttcacctgcaaactctttaaacaacaagcagtacaatc aagctgtgaatgcacagggatcttcctcaatgtacaatccatttcaaagagaatccgaccattcaactttaaaaggaagg agaaacagtccagatgttagcatgtcaacagtgggtcctgcatatactgagaaatctttcagcacagtgactaaacaaat tggtcaaactttgaatgctgaggaaacttactcagtaaacagcccatttcaagcaggatctctccattcaaatttgaaag ggaggagaaagaatccagatgtcagcgtgccaacaatgagtcatcctgcatttgctgaagatcatcgaaacctaggaaac cagaatgttatgagctcagatcttacgatgagtcaaaggaaagatgtgcaaaaaggcttccagtcgcccctaatcactgc tggagaaactgcaaatatcctgaaaggttctaagcgtaacctttatggagagctacaatttgctaccaaatcagaagtag agcagaatgatgtcccccagagacagtgtaccataccttgtaccttcccttctgtggctgtgtataaacaaatactgaca gcagctctcaaagagcatttaaacatcatactgtttacactggccaagaactatcaccacagcatggcaaaaatagatac aagtgcttatcaacaccagccttcaggcccaaatagaggcaaagctaccacccacaccagtagtaaccctgtatgtaatt gtggcgctccatccaagatggtacaagtgaaaaaggagggaccaaataaaggaagattcttcttcgcctgcaatgctcaa aggaaccaacaatgcaagtttttccaatgggcagatcaagaaaccaagtcaggcgggcctaaatcaggaggaaatgacag aatgaagatgtcagattctggtaacattacaacgtacctaagaagccagcatgtttatttctactgtgaatgtcagtttc tgaagaaaacaatggaaaatatcatgagtcacttccgtagaaatgttcctaaatgggtgaaagacaattatgcagcaaaa aacaacattaacgagaagaaaaagtacatcaggctatcaaagaaagattcctcctcattgttttcgaaagatgacctttg gatcgtatctcagcattttgactttgagcctgctcacacttttcttgccaagagtgtgtattttggtcctacatcgggaa atgaagtggaaatagaacctatcacgtcattttctccctctaattggccaaatgaaggtaactgccatgccattttgtct ggaaatatttcatctgaattgagttatttggaaaacctacaggaaaatctgcattgtaccaccgtaccattactccccca tttgttaaacagggaaggtgaactacagacatcaaaggccttcaaagcccctgtaagaactagtacatccactaacatcc actgccctgatgatcttgtgggatccctagccaatgaatttgtacagcaatataaactaaatcctgaccaagaggaggct ttaaggagagtttctcatatgttctgcaagtctaagagcactgatacagatcctatattactggtccatggtgtgtttgg agcaggcaaaagctttctactgtccttggtgattatgttcttgctcagagtatttgagctgaatgacacttactcacctg gagtcccctttgcatggaaagttcttgtgtcttcaacaactaatgtagctgtagacaggattctaaatgggttactggac ctgggctttgaggactttgtgagggtggggagtgtcaagaagatagccaagcctgttctaccttacagcgtacatgccac tggcacagaaaaccaggagttgaaggacctacaagagatgttgagaagtggagacctctctatagcggaaaaacaggaag gtgaactacagacatcaaaggccttcagagcccctgtcaggactagtacgtccactaatatacactgccctgatgatctt gtgggatccctagccaatgaattcatacagcaatataaactaaaccctgaccaagaggaggctttaaggagagtttccca tatgttctgcaagtctaagagcaatgatatagatcccatattactggtccatggtgtgtttggagctggtaagagctttc tactgtccctggtgattatgtttttggtcagagtatttgagctgaatgacacctactcacctggagtcccctttgcatgg aaagttctcgtgtcttcaacaactaatgtagctgtagacagaattctaaatgggttactggacctcggctttgaggactt tgtgagggtggggagtgtcaagaagatagccaagcctgttctaccttacagtcatgtccgccatagcatagagaagcata ggcttggagaaaataaaaagagattgggaaatgtaaaagtagtgggtgtaacctgtgcatcatgttcagcaaatagtctg aaaggaatgaaattccctattgtgatactggatgaaagcagtcagatgacagaaccagcctcattacttcctatcgctaa atttagctgtgaaagattgctccttgtaggcgatcctaagcaattagatccgaccatacagggttcagaatcttcacata cccagggactggagcagactttgtttgacagacttatagtaatgagctaccttcctacggtgtgtttctataacgtatct aacggtgaagaatccatggacacagacggcagtttctctaacgccaaggaagctgactttgtagttttcctgatcgagag cttagtcgcgagtggagtggaccctggtagtataggtgttataacactgtacaagtcacagatgtataaaattgtagctc agttaggaacaagcaggaactgttcccaaaaagagaccaagtccactcttgtgtcaacagttgatgctttccagggagga gaaagagacatcattattctgtcttgtgttagaaccaagagtgtaggatttattgacaatgaaaaacgtactaatgtagc actgaccagagcgaggcatcacatgctgattgttggaaacaaaaccaacttgaaaaggaacaaattatgggggaagatca tcaatttgtgtgaaagtaacccagatggtttacaggaatcatcagaggctgaggaggttctacagacagcctcagaggaa gcctgtacctcctcaatagggactgtcaactcaagcctgactgaacatgatgacaataatactacaaagaagccaaaacg ggggaggaaaagaaagatgaaaaattctagaaacaaagattcccaggagtcaagtccacccatgtcactttcaggtctga atagtttttaa |
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Protein
| Protein ID | pfu_aug2.0_320.1_00600.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_320.1_00600.t1 MAERQFIVLYTHQKTKKAKTWQDGVLKMPSAGSKGVLFDDKGMKIDSIHVRPQDLTPGEQLESDRHYIMIEEEKAISSTG MGEVRTSEAAVNQSRAPTLPPPQTRPQNAVRVGLKRKRTGFNPPRMVRPVENSSDGTPDVRPQREAHEDLSLLNQTHSFS RNDQSSFHLRFKQLQTNQSNTFQQNSSETKSSFHPTESGHDFESTSSNNSSASPFSKYYRNSSATLNSDSSFMKNDGLSS PQQKIPSPWSTYGRNGLNKRNSPVIGKVYVSKNEDGTFSSEDPLQESSLNLAVFRGTVTGKSNFDKGLASEKNDVANESV AKSETSAKRNAAQILALMGNRNAAVGTMLDSVRPQSFEQCLKKSDKTIYNDSSKYQDSLNVSYNWVETPTGSQFRSEEQS TNSDGFQTLQCKYQKESWTLNNETEGIDGRACTQNENQNLSDASLPAQNECRSFVENTNGTHVDDEENEDEDEDEDESEE DMAGIDTAQPDFHISFSPLSQFSNDLEDSEDNVIEKTESQNDESNCTGTISSTLKLCNNDANSDSRIPESEQDVEMKGSP EDLPDSTEQLHVVESKVNDKCVLNRTENSENDSSLNGKVVIDKSLFDAGGSSTDKCEMKTLSSCENKEGAQDDTNEPLAQ EEPKGEDATKEEEVQVMTEEDCSDHTEEQAFQRHVDSKEGAMEEPQFQEDGKVDFSEEQNFQEDGMVDFSEEQNFQENGM ESLTKETHLEDDAMVYDVINEQLISEDDMEKSSANEQLIHGISKDRHITKNEFQKQEGKTNHSIGSSKADSQGSFHVMSS EGNLNKLDFSQDSMANFSLFSSEEFKPCAQKYSTAGNKESRSQDSMANFSLFSSEEFKPCAQEYSTAGSKESRRSNSLPF SDVECVGSCPLSHESKDDGACGNDTSNPEQSMEGNYENFHSVDEATNAQNEEELFVPSDEHALTEIENKTSEEEQGIGNS NCSLSQDVDGTPASVHAGSSFSEERQEVGHENSYLSQDVNAISSSVETTESFKNSPICENSSDFVKANRDDSDILPCNLD KRQEVSKSSSIVIEDNYSDFREEQLAAEPKNFPHVERTKTRMKEGYLDLRQEHHRVEPGCLPCVDAGKASTELVHQSCVR DELNLCQTLENPSKFENLTNPRTTFVKRETTPQGLVDKLSEKLTSYKMKGSLSGVGAKRQSKDWRNVSLCNSLNSTLEEQ FFPAMDRSLVCNMKGMHNMNRLNCDSGLNSKWGKFIQEEESDELDSLLNCSFDLKTSPNYKIPNSSHGLRTISNDVFSHN SDGISLQHDNHGTLNSVPKEATKTNIDASNCKVDSRRFKDQNSRSQHFRQEEAGENFAIDDSKDKSWISRLQGYENSNSK RISPNFDVNASPELNFPSTLPKWHQTNFTSYNQSPDVVPKFSPANSLNNKQYNQAVNAQGSSSMYNPFQRESDHSTLKGR RNSPDVSMSTVGPAYTEKSFSTVTKQIGQTLNAEETYSVNSPFQAGSLHSNLKGRRKNPDVSVPTMSHPAFAEDHRNLGN QNVMSSDLTMSQRKDVQKGFQSPLITAGETANILKGSKRNLYGELQFATKSEVEQNDVPQRQCTIPCTFPSVAVYKQILT AALKEHLNIILFTLAKNYHHSMAKIDTSAYQHQPSGPNRGKATTHTSSNPVCNCGAPSKMVQVKKEGPNKGRFFFACNAQ RNQQCKFFQWADQETKSGGPKSGGNDRMKMSDSGNITTYLRSQHVYFYCECQFLKKTMENIMSHFRRNVPKWVKDNYAAK NNINEKKKYIRLSKKDSSSLFSKDDLWIVSQHFDFEPAHTFLAKSVYFGPTSGNEVEIEPITSFSPSNWPNEGNCHAILS GNISSELSYLENLQENLHCTTVPLLPHLLNREGELQTSKAFKAPVRTSTSTNIHCPDDLVGSLANEFVQQYKLNPDQEEA LRRVSHMFCKSKSTDTDPILLVHGVFGAGKSFLLSLVIMFLLRVFELNDTYSPGVPFAWKVLVSSTTNVAVDRILNGLLD LGFEDFVRVGSVKKIAKPVLPYSVHATGTENQELKDLQEMLRSGDLSIAEKQEGELQTSKAFRAPVRTSTSTNIHCPDDL VGSLANEFIQQYKLNPDQEEALRRVSHMFCKSKSNDIDPILLVHGVFGAGKSFLLSLVIMFLVRVFELNDTYSPGVPFAW KVLVSSTTNVAVDRILNGLLDLGFEDFVRVGSVKKIAKPVLPYSHVRHSIEKHRLGENKKRLGNVKVVGVTCASCSANSL KGMKFPIVILDESSQMTEPASLLPIAKFSCERLLLVGDPKQLDPTIQGSESSHTQGLEQTLFDRLIVMSYLPTVCFYNVS NGEESMDTDGSFSNAKEADFVVFLIESLVASGVDPGSIGVITLYKSQMYKIVAQLGTSRNCSQKETKSTLVSTVDAFQGG ERDIIILSCVRTKSVGFIDNEKRTNVALTRARHHMLIVGNKTNLKRNKLWGKIINLCESNPDGLQESSEAEEVLQTASEE ACTSSIGTVNSSLTEHDDNNTTKKPKRGRKRKMKNSRNKDSQESSPPMSLSGLNSF |
|