Gene
| Gene Model ID | pfu_aug2.0_320.1_00602 |
|---|---|
| Locus | scaffold320.1 : 166005 ... 177492 : + |
| To GenomeBrowser | scaffold320.1:166005..177492 |
| Genes list of scaffold | scaffold320.1 |
| Synonym | pfu_aug1.0_180072.1_06763 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| synaptotagmin 15a | GO:0008152 GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_320.1_00602.t1 | 2 | 1 | C2 | 109 | 195 | 7.4e-25 | 86.6 | 8.9e-18 | 4.4e-14 | 52.0 |
| pfu_aug2.0_320.1_00602.t1 | 2 | 2 | C2 | 241 | 308 | 7.4e-25 | 86.6 | 1.1e-11 | 5.5e-08 | 32.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_320.1_00602.t1 | gi|676461942|ref|XP_009056107.1| | synaptotagmin 15a [Lottia gigantea] | 0.0 |
| pfu_aug2.0_320.1_00602.t1 | gi|585722837|ref|XP_006813530.1| | PREDICTED: synaptotagmin-15-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_320.1_00602.t1 | gi|260802288|ref|XP_002596024.1| | hypothetical protein BRAFLDRAFT_84110 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_320.1_00602.t1 | gi|198430101|ref|XP_002127842.1| | PREDICTED: synaptotagmin-15-like isoform X1 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_320.1_00602.t1 | gi|723125835|ref|XP_010295255.1| | PREDICTED: synaptotagmin-15-like [Phaethon lepturus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_320.1_00602.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_320.1_00602.t1 atgaaaaggaattgttcgcccaaattggagaagagaaagtcattccccgatgctttggccgacacaagaggtaaaatggt ccgatcactaaccctagcctctgttccttccttcacattacccccagaacgtgtgcagccccaaaatggacacgagcgaa gctgtagtcttaccgccatgcagtatcaacaacatttgattggacatttggaaccggaattgtatcggggtttgagcttc tctgacgattcatctctatgcctgccaccatcagagtacggacgtctgtggttttctgtcctctatgatgctgctgtaga acaactcaatgttaacctcgttaaagttagggaacttccaggccggggaagaaacaatgcaccacgtgacccatttgtaa aaatatttttacttccggatgaaaggacatgtcgaatttcaaaagtcaggaaaaagactctttctcctatgttcaacgaa agctttactttccaggtagatcctgattcaatacgcagtaaaactcttcgtttctctgtttatgacgtcgacaaaagacg agtacgccattccctaggccacgttcttgtcaatctagcagatattgatattctgaaaggcgattccatgttcaaagatc tagaactgacatcaacgatgtgtgcgtcattaggagatctgcagatcagttctacatacttacctaatgtggataaagtc aagattgtcgttattggtgcaagaaatcttcgacaaattgacattgatcaaaataatagtctttttgtgaagcttcagat gattcacggtcgcaaaataagcaaagtaaagaaaaccatgctaagaccctcaacgtctgaaccagtgtttaacgaacctt tttcattttcaatccatggaaaaataattgacacttgtagctttgaactttctttaatgacaactacccgaactccaatg agtcacgacgaggtctatggtcgaattgtccttggttccttcatgtttgcacgaggggaggagcttaaacactggcagga aatgatgtcacaaccacgagtcgccatcactagatggcatcaacttaatcctgtatcccaccatgattga |
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Protein
| Protein ID | pfu_aug2.0_320.1_00602.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_320.1_00602.t1 MKRNCSPKLEKRKSFPDALADTRGKMVRSLTLASVPSFTLPPERVQPQNGHERSCSLTAMQYQQHLIGHLEPELYRGLSF SDDSSLCLPPSEYGRLWFSVLYDAAVEQLNVNLVKVRELPGRGRNNAPRDPFVKIFLLPDERTCRISKVRKKTLSPMFNE SFTFQVDPDSIRSKTLRFSVYDVDKRRVRHSLGHVLVNLADIDILKGDSMFKDLELTSTMCASLGDLQISSTYLPNVDKV KIVVIGARNLRQIDIDQNNSLFVKLQMIHGRKISKVKKTMLRPSTSEPVFNEPFSFSIHGKIIDTCSFELSLMTTTRTPM SHDEVYGRIVLGSFMFARGEELKHWQEMMSQPRVAITRWHQLNPVSHHD |
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