Gene
| Gene Model ID | pfu_aug2.0_321.1_03990 |
|---|---|
| Locus | scaffold321.1 : 16156 ... 21567 : + |
| To GenomeBrowser | scaffold321.1:16156..21567 |
| Genes list of scaffold | scaffold321.1 |
| Synonym | pfu_aug1.0_17891.1_25672 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_321.1_03990.t1 | 1 | 1 | TauD | 10 | 231 | 2.2e-18 | 66.8 | 4.1e-22 | 3.0e-18 | 66.4 |
| pfu_aug2.0_321.1_03990.t1 | 1 | 1 | Lectin_C | 299 | 389 | 2.3e-07 | 31.4 | 6.8e-11 | 5.0e-07 | 30.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_321.1_03990.t1 | gi|699239389|ref|XP_009857689.1| | PREDICTED: alpha-ketoglutarate-dependent sulfonate dioxygenase-like [Ciona intestinalis] | 4.0e-30 |
| pfu_aug2.0_321.1_03990.t1 | gi|641674626|ref|XP_008186754.1| | PREDICTED: uncharacterized protein LOC100163446 isoform X1 [Acyrthosiphon pisum] | 8.0e-30 |
| pfu_aug2.0_321.1_03990.t1 | gi|326320019|ref|NP_001191877.1| | uncharacterized protein LOC100163446 [Acyrthosiphon pisum] | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_321.1_03990.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03990.t1 atgtctgacattgaccaaaagtgtgctgataaaatcagactcgaggccttcatgcataggttccttgtttttcgtggaca agatatcccaggggaggaacaagtcagaatcacatcgctccttgggtccgctcacgaagaaacctcaactccgggtagag agaaacaaagtaatatattggacaaacgattggctttcttgtccaacgatcccaaagagggactgctcggtaatggtgta gagggatggcattcagatggtaacacaatagatacaccccatttgtttactctgttgtactgcaaaaaagccagtcgact cggtccaacccttatcgtgccgctcaaagaaatagtcgatgcgctctctgaagatgaaagaaattatttagagaaaattc acttcgtaagtggtttcaactcatcgattgtgcatccacttttgtacaaacacccctttagaaacgacgatacagttttt cttgctcttggttctttgtctggacagtatctgatggagtcggaagaagatggagggagaaaattagtccaactctcaaa ggacgaaactcagtatgtaatggatctactcgaatctaaacttttaagcgccaatttgatattcgctttgaattataaac caggtgacttcctcataatgaacaaccaggccgttgcgcatatagccggacctggttcccaacttccgccggaagtagta ggagttcgactgatacatcggtcgacagttcaaggtgaatcaaaaccaagtaaagaagtgaaagtgaactacaaatgtgc taaatattcaccttttgaagaaggatattgtatcttctcattaaaagattctgtattttacccccgagtcgggtatttcg atagccaacccgtagcgagacaaagatgcaaaagtttcaacaagtttgcagacctagctgctattcactctgaggaatgg aatgatttggtaaagtcgataattaccgaaaaaggacatcctcattggattaatgccagtaatcctcagggaacagatat tttttggggtggggaaaaaggtcacttcgccaattgggatccggagcagcctaacgaccatgggggatatgaggactgtg ttgtgttggggccttttgccaagtggtatgacctgccatgcagcgggcctaagttgcacgataaagacaatatggctccg gtaatagtgtgggaagatggtattaggaaaatgctcaacgtctacccattatgtggtgtttctcagaagcacttgcatat cgatctataa |
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Protein
| Protein ID | pfu_aug2.0_321.1_03990.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03990.t1 MSDIDQKCADKIRLEAFMHRFLVFRGQDIPGEEQVRITSLLGSAHEETSTPGREKQSNILDKRLAFLSNDPKEGLLGNGV EGWHSDGNTIDTPHLFTLLYCKKASRLGPTLIVPLKEIVDALSEDERNYLEKIHFVSGFNSSIVHPLLYKHPFRNDDTVF LALGSLSGQYLMESEEDGGRKLVQLSKDETQYVMDLLESKLLSANLIFALNYKPGDFLIMNNQAVAHIAGPGSQLPPEVV GVRLIHRSTVQGESKPSKEVKVNYKCAKYSPFEEGYCIFSLKDSVFYPRVGYFDSQPVARQRCKSFNKFADLAAIHSEEW NDLVKSIITEKGHPHWINASNPQGTDIFWGGEKGHFANWDPEQPNDHGGYEDCVVLGPFAKWYDLPCSGPKLHDKDNMAP VIVWEDGIRKMLNVYPLCGVSQKHLHIDL |
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