Gene
| Gene Model ID | pfu_aug2.0_321.1_03993 |
|---|---|
| Locus | scaffold321.1 : 138545 ... 140815 : - |
| To GenomeBrowser | scaffold321.1:138545..140815 |
| Genes list of scaffold | scaffold321.1 |
| Synonym | pfu_aug1.0_7021.1_02366 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_321.1_03993.t1 | 1 | 1 | HLH | 133 | 186 | 1.3e-16 | 60.0 | 2.6e-20 | 3.9e-16 | 58.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_321.1_03993.t1 | gi|676451724|ref|XP_009052799.1| | hypothetical protein LOTGIDRAFT_159845 [Lottia gigantea] | 1.0e-32 |
| pfu_aug2.0_321.1_03993.t1 | gi|524876627|ref|XP_005095025.1| | PREDICTED: ankyrin repeat-containing protein kinase A-like [Aplysia californica] | 1.0e-27 |
| pfu_aug2.0_321.1_03993.t1 | gi|391343281|ref|XP_003745941.1| | PREDICTED: protein atonal homolog 7-A-like [Metaseiulus occidentalis] | 1.0e-24 |
| pfu_aug2.0_321.1_03993.t1 | gi|240963703|ref|XP_002400731.1| | conserved hypothetical protein [Ixodes scapularis] | 2.0e-21 |
| pfu_aug2.0_321.1_03993.t1 | gi|676451717|ref|XP_009052797.1| | hypothetical protein LOTGIDRAFT_159843 [Lottia gigantea] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_321.1_03993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03993.t1 atgctgaaggatcattgtcgttcaaaagatagggagctcgtaccaatggagatctctgatgataaaaatacagtggacat tataagtgaaaatgaaatgaaggacatagcggtggccggagcaaacgatgaccagtgtccagtaaaaagtgaaattgtag attcagaagaacaaggtaaagacgcttgctgctcagactccctgcaagaattgcagcaaccggaatgtaccctgaggagg tccacacgaagaaagtctaaaccatcagatgcaaatgacaatttggagtataatttgcgaacgaacactctagtgaatcg agtgataagcgaaaggaagcgaaaagaacctaagttaccaaagccaaagtcgaaaccgcctcctcttagtaaatatagga gaaagacagctaatgcacgagaaaggtgtaggatggttgaaattaatcaggcttttgaagaacttagaaatgtgttgcca aatattgaagcagggcctgcaagtaaacttacaaaaattcatacgctgaggcttgctctaaattacatctcagcgttacg tcagactcttgggtacgatgacgacatgaactcagatgcgtcatcgatgcgatcgtctagtatttcatcttcatcgggtg acgaacagtgcttgagtccgtcggatggtgaacttagtattttgaattcagaagacagtagtgatctgctaagctcagat gacacagacatgataaattctgaggaacttttgtcggataaccttgacctcgtgcagcttgaccttgatggttgcacgga tttgttgttgagctga |
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Protein
| Protein ID | pfu_aug2.0_321.1_03993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03993.t1 MLKDHCRSKDRELVPMEISDDKNTVDIISENEMKDIAVAGANDDQCPVKSEIVDSEEQGKDACCSDSLQELQQPECTLRR STRRKSKPSDANDNLEYNLRTNTLVNRVISERKRKEPKLPKPKSKPPPLSKYRRKTANARERCRMVEINQAFEELRNVLP NIEAGPASKLTKIHTLRLALNYISALRQTLGYDDDMNSDASSMRSSSISSSSGDEQCLSPSDGELSILNSEDSSDLLSSD DTDMINSEELLSDNLDLVQLDLDGCTDLLLS |
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