Gene
| Gene Model ID | pfu_aug2.0_321.1_03998 |
|---|---|
| Locus | scaffold321.1 : 305022 ... 308365 : - |
| To GenomeBrowser | scaffold321.1:305022..308365 |
| Genes list of scaffold | scaffold321.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_321.1_03998.t1 | 1 | 1 | DUF4504 | 22 | 250 | 1.9e-27 | 96.2 | 2.4e-31 | 3.5e-27 | 95.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_321.1_03998.t1 | gi|676481281|ref|XP_009062323.1| | hypothetical protein LOTGIDRAFT_166652 [Lottia gigantea] | 2.0e-20 |
| pfu_aug2.0_321.1_03998.t1 | gi|260788493|ref|XP_002589284.1| | hypothetical protein BRAFLDRAFT_242568 [Branchiostoma floridae] | 6.0e-19 |
| pfu_aug2.0_321.1_03998.t1 | gi|597781625|ref|XP_007254383.1| | PREDICTED: UPF0739 protein C1orf74 homolog [Astyanax mexicanus] | 1.0e-17 |
| pfu_aug2.0_321.1_03998.t1 | gi|349585414|ref|NP_001088680.2| | UPF0739 protein C1orf74 homolog [Xenopus laevis] | 2.0e-17 |
| pfu_aug2.0_321.1_03998.t1 | gi|62955415|ref|NP_001017723.1| | UPF0739 protein C1orf74 homolog [Danio rerio] | 2.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_321.1_03998.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03998.t1 atgggcttgacatggaaagaccttatcctcaaacattttggccagaaactgaaaaacagagtagaggaatttaggttgaa cattctagccgtagatgtgggactcaagccaggatacttgtttgactttggtgttcaaaatgtgcataccatatcaatct tcctgaaagatctgaatttacataatctcataggaaaccatctaatggcagttaaagctgacatggattatctcatcgta aataacctctgtttgtgtgaagtgtatgataacaagggagaccactacagatttgtagatgtatcacctcgtcttacagc tccaagggaaataactttaacagaatttgaatcttgtgcttggagagatgatttatttaacattattgacagtatgaaag gctgcgaaaatgaaaatgtcttcgaaattcctcctatgaaattgttgaatatgacttcattatttggaattctgcttgga tatccaattgtttactggtatgaaacagacgttgttgatacagggaactgtctctgcatggagccactacaccattacaa agttgtggggaaaactgatcagggcttcagacatgtgatttactctttcagcgctccttcgtgtcttagtgacataaaag atcatgtacaaaaatggtttgaaaatattaaaaatagtaaaatgtggagcagttgtctaagagaaatttattttgaaatt aatacagtgacacttcctgttgtaactttatag |
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Protein
| Protein ID | pfu_aug2.0_321.1_03998.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03998.t1 MGLTWKDLILKHFGQKLKNRVEEFRLNILAVDVGLKPGYLFDFGVQNVHTISIFLKDLNLHNLIGNHLMAVKADMDYLIV NNLCLCEVYDNKGDHYRFVDVSPRLTAPREITLTEFESCAWRDDLFNIIDSMKGCENENVFEIPPMKLLNMTSLFGILLG YPIVYWYETDVVDTGNCLCMEPLHHYKVVGKTDQGFRHVIYSFSAPSCLSDIKDHVQKWFENIKNSKMWSSCLREIYFEI NTVTLPVVTL |
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