Gene
| Gene Model ID | pfu_aug2.0_321.1_03999 |
|---|---|
| Locus | scaffold321.1 : 312556 ... 313046 : + |
| To GenomeBrowser | scaffold321.1:312556..313046 |
| Genes list of scaffold | scaffold321.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ninjurin-1 | GO:0007155 GO:0044767 GO:0048856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_321.1_03999.t1 | 1 | 1 | Ninjurin | 19 | 119 | 1.4e-25 | 88.9 | 2.3e-29 | 1.7e-25 | 88.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_321.1_03999.t1 | gi|348564858|ref|XP_003468221.1| | PREDICTED: ninjurin-1 [Cavia porcellus] | 5.0e-25 |
| pfu_aug2.0_321.1_03999.t1 | gi|731273481|ref|XP_010605862.1| | PREDICTED: ninjurin-1 [Fukomys damarensis] | 9.0e-25 |
| pfu_aug2.0_321.1_03999.t1 | gi|533192255|ref|XP_005408954.1| | PREDICTED: ninjurin-1 [Chinchilla lanigera] | 2.0e-24 |
| pfu_aug2.0_321.1_03999.t1 | gi|507713137|ref|XP_004647615.1| | PREDICTED: ninjurin-1 [Octodon degus] | 2.0e-24 |
| pfu_aug2.0_321.1_03999.t1 | gi|585176874|ref|XP_006740177.1| | PREDICTED: ninjurin-1 [Leptonychotes weddellii] | 3.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_321.1_03999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03999.t1 atggacctcttgtttcaggccaaccatggggctacaaacagcatcgtcaatagaagtgcctatgagaagaaaaagacttt ggcagagggacttctggacattggacttttgattgccaatgcatctcagttaaaaaccatcatttctgcaggtgacgcct acaaatatttctggccaatggtgatcatgctagggctgtcaatcattcttcagcttggagtaggcgtgattctaatccta ctgggatttgccgaaggagatatacaaaaagacgagaaatccaggaaaatgaacaatgttactgtaggacttattcttgc tgtcctggtattgaatgtattcattggtgcttttggaattgaactaacatga |
|
Protein
| Protein ID | pfu_aug2.0_321.1_03999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_03999.t1 MDLLFQANHGATNSIVNRSAYEKKKTLAEGLLDIGLLIANASQLKTIISAGDAYKYFWPMVIMLGLSIILQLGVGVILIL LGFAEGDIQKDEKSRKMNNVTVGLILAVLVLNVFIGAFGIELT |
|