Gene
| Gene Model ID | pfu_aug2.0_321.1_04002 |
|---|---|
| Locus | scaffold321.1 : 345157 ... 351275 : - |
| To GenomeBrowser | scaffold321.1:345157..351275 |
| Genes list of scaffold | scaffold321.1 |
| Synonym | pfu_aug1.0_3626.1_30476 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nanos-like protein | GO:0003723 GO:0005737 GO:0008270 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_321.1_04002.t1 | 1 | 1 | zf-nanos | 221 | 274 | 8.4e-24 | 83.3 | 5.6e-27 | 1.4e-23 | 82.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_321.1_04002.t1 | gi|201023298|ref|NP_001128394.1| | protein nanos [Nasonia vitripennis] | 3.0e-22 |
| pfu_aug2.0_321.1_04002.t1 | gi|269784887|ref|NP_001161595.1| | nanos-like protein [Saccoglossus kowalevskii] | 5.0e-20 |
| pfu_aug2.0_321.1_04002.t1 | gi|556988159|ref|XP_005999283.1| | PREDICTED: nanos homolog 1 [Latimeria chalumnae] | 9.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_321.1_04002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_04002.t1 atggttttgcattgtctggagacgttgagattcaaacccacaacctatgggttcgtagtcaccacaataaccactacgct accagcaagtcccaagcacagtgctgttgacaatctggagaagctatgtcgcctcagtgtcttggactctatggatgatg aaaatgttggtcccattgaccttaatggtgacgcacattccgacacgtcttcatcaagcggacatgagcacctcaaccag ccccttctagtggactaccctaatggtgaccagttctactccgatgatggttgtatgcccgcagtcacaatgcaagccag tccagggtttcaagacttcgtccttcccatgaggccagtcaacagaagaagcaatggtttccatagcaacaattcacaga gcagcagtatgtctgacattgctaaccaatctaatggtaactatggtaaccattccaatggtaactatagcaaccagtcc aatggtaactttgctaaccagtccaatggtaactttgctaaccagtccaatggtaacttgcagacagttggcagtgtgtt gggtgcgatccaggagctccttcagaacagcgatcctgatgctctgattgaacctgggttgctgaatccacaaagacgca tgcgcttcgaggagaaatactgtgccctgtgcaagaagaatggggaaacccgagagttctataccactcatgttctgaaa gacaatcgtggaaaagtgatatgcccgatcctcaggaaatactcgtgtcccaagtgtggtgccaccggggataacgctca cactctgcgacactgcccgatcacacgcggcacagaccagcagtctgtcatggagaccatcaaaaccccccgcagcagct gtggaaggcgattctag |
|
Protein
| Protein ID | pfu_aug2.0_321.1_04002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_321.1_04002.t1 MVLHCLETLRFKPTTYGFVVTTITTTLPASPKHSAVDNLEKLCRLSVLDSMDDENVGPIDLNGDAHSDTSSSSGHEHLNQ PLLVDYPNGDQFYSDDGCMPAVTMQASPGFQDFVLPMRPVNRRSNGFHSNNSQSSSMSDIANQSNGNYGNHSNGNYSNQS NGNFANQSNGNFANQSNGNLQTVGSVLGAIQELLQNSDPDALIEPGLLNPQRRMRFEEKYCALCKKNGETREFYTTHVLK DNRGKVICPILRKYSCPKCGATGDNAHTLRHCPITRGTDQQSVMETIKTPRSSCGRRF |
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