Gene
| Gene Model ID | pfu_aug2.0_3222.1_09081 |
|---|---|
| Locus | scaffold3222.1 : 19586 ... 25619 : + |
| To GenomeBrowser | scaffold3222.1:19586..25619 |
| Genes list of scaffold | scaffold3222.1 |
| Synonym | pfu_aug1.0_6607.1_60064 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3222.1_09081.t1 | 3 | 1 | DUF2152 | 99 | 302 | 1.4e-11 | 43.3 | 2.7e-10 | 2.0e-06 | 26.3 |
| pfu_aug2.0_3222.1_09081.t1 | 3 | 2 | DUF2152 | 312 | 352 | 1.4e-11 | 43.3 | 0.014 | 100.0 | 0.8 |
| pfu_aug2.0_3222.1_09081.t1 | 1 | 1 | Glyco_hydro_65m | 344 | 687 | 0.0 | 242.2 | 0.0 | 0.0 | 239.0 |
| pfu_aug2.0_3222.1_09081.t1 | 3 | 3 | DUF2152 | 650 | 710 | 1.4e-11 | 43.3 | 1.1e-05 | 0.082 | 11.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3222.1_09081.t1 | gi|676440424|ref|XP_009049172.1| | hypothetical protein LOTGIDRAFT_141357, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3222.1_09081.t1 | gi|260790605|ref|XP_002590332.1| | hypothetical protein BRAFLDRAFT_121385 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3222.1_09081.t1 | gi|260825279|ref|XP_002607594.1| | hypothetical protein BRAFLDRAFT_261940 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3222.1_09081.t1 | gi|734626704|ref|XP_010741506.1| | PREDICTED: acid trehalase-like protein 1 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_3222.1_09081.t1 | gi|658855376|ref|XP_008410324.1| | PREDICTED: acid trehalase-like protein 1 [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3222.1_09081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3222.1_09081.t1 atgattacctatttttgtatactattcgccatagcgcaactctctaccctcgcgtcttgcgcccatacaatcaacaacaa tggagacacggaggagactaaactggatttttctgtccattttccccaagtggcatctaattcggatttacgatttactt cttcaagactgagtggtgagctaagtaccaggaaacgagtgagatatgacccccaaacagatgctaccctcgttcatggg cgtgacagactcagggtcaggactcgtcaggcaccgacacgcccctcttacctcagagaagtggacacagttctgaaatc caagagcttttcttctgatacccgcttgcgaccctctttgggtaatggacacgtagccacggttgtaaaaaatgatgcaa tatttatgaatggtttatacaatggatataacgtaacgagtcatagagcacgaataccctcgccactgatatctgacctc aatgtatcgtgttttctgctactgaataatccttgctcctcggttcaaattgcatacgcgttagatgttgggggaggaat cttcattcagactactaccggaaatggattcgtcatcaaactgacgtcatatgcgcatagaactattcctcagcttttgg ttcaggaaatggacatcatcaatacgctaaaaagaccgctgcaaattatgacaaacgtaaacagtggaaaatcaagtgaa gatattgattttacttcacaatacgtcgcaaattatagagttgagtcgggtaggacccgtcagccggagtacaacataac cggactacaaaatgtaacggtcatatctaccaacgtaccaaagactatagtggcaactccgtacgtcagagaaacacatg tgttcctcgtcagtgtggacaatgattacgtcacagctaaacaagcttatgacgaagaggagcactcccaggcgtggtac gacgtctggaaacggggaaggatatcctttgagggaaacgatacactgtcacaaatcacgttcgccgctatgtactacat actcagcgcgttgcctctcaaagaaactcctgattttgttggtctgtcacccggagatcttgcacatggagattttaaga aggactaccaaggccatgtattctgggaccaggaaacctggatgtatcccccggtgcagatgctacacgcggatattggg aaagccatcatacaatctagactccgtgtcctggacacagcaaagctttatgcgaagtccaggggatatcaaggagccat gttcccgtgggagagtgctcttagtggtctaaacgtatgtccctgggatccagccacgttatacgagcagcacgtgaccg gtgacgtagcactcgctttacgtcagtacctcactatgacgaatgatactagtattttaaccaaaggaagggggttagag gccatcacggaaatagctaacttttgggcttcaagggtagagaaacaacctggcagcgatcagtatggagtttttggggt tatgccgcctgacgaatatcacgaaaaagtgaacaactctgcatacaccaatgttatcgccaaaattagccttctgcttc cgaagtttgcctatggtctgattggccaactctctgatgtcagacatgaagacatcgggaacaatatgtacattcctttt gacaacaaaataggatatcatcccgagtttgatggatacataaataatataactgtcaaacaagcagacgttgtcttact gggataccctttgatggagccaatggatcaacaaatcagacgaaacgatctggaaatatataaaaaggtgacccccggtg gaccagccatgacctgggggatgttctccattggatacctagagctgaatgatacagtcgcggcagccgatatgttcctc agacaactgctcaacgtcgtccctcctttcaatatctggactgaaaatattaagcaagagggagctgttaactttatcac aggaatgggaggttacctgcaatcactcatatttgggtacggtggtttccgaatgtatccgaattatttagaattttccg gaacacctccgcccggtgtcacttccttcaatataactggaatagactatctcggtggttctctggactttacgttttac aataatgtgatgacggtgacacaaacagaaatggcagctagagaattgaaaattaaattgtacaaaacaggtttaacgca tgcgttacacgtaggccaacaaatgctgtatggcaatcaaaaggcggctattatgccagtgtga |
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Protein
| Protein ID | pfu_aug2.0_3222.1_09081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3222.1_09081.t1 MITYFCILFAIAQLSTLASCAHTINNNGDTEETKLDFSVHFPQVASNSDLRFTSSRLSGELSTRKRVRYDPQTDATLVHG RDRLRVRTRQAPTRPSYLREVDTVLKSKSFSSDTRLRPSLGNGHVATVVKNDAIFMNGLYNGYNVTSHRARIPSPLISDL NVSCFLLLNNPCSSVQIAYALDVGGGIFIQTTTGNGFVIKLTSYAHRTIPQLLVQEMDIINTLKRPLQIMTNVNSGKSSE DIDFTSQYVANYRVESGRTRQPEYNITGLQNVTVISTNVPKTIVATPYVRETHVFLVSVDNDYVTAKQAYDEEEHSQAWY DVWKRGRISFEGNDTLSQITFAAMYYILSALPLKETPDFVGLSPGDLAHGDFKKDYQGHVFWDQETWMYPPVQMLHADIG KAIIQSRLRVLDTAKLYAKSRGYQGAMFPWESALSGLNVCPWDPATLYEQHVTGDVALALRQYLTMTNDTSILTKGRGLE AITEIANFWASRVEKQPGSDQYGVFGVMPPDEYHEKVNNSAYTNVIAKISLLLPKFAYGLIGQLSDVRHEDIGNNMYIPF DNKIGYHPEFDGYINNITVKQADVVLLGYPLMEPMDQQIRRNDLEIYKKVTPGGPAMTWGMFSIGYLELNDTVAAADMFL RQLLNVVPPFNIWTENIKQEGAVNFITGMGGYLQSLIFGYGGFRMYPNYLEFSGTPPPGVTSFNITGIDYLGGSLDFTFY NNVMTVTQTEMAARELKIKLYKTGLTHALHVGQQMLYGNQKAAIMPV |
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