Gene
| Gene Model ID | pfu_aug2.0_324.1_13988 |
|---|---|
| Locus | scaffold324.1 : 1854 ... 19188 : + |
| To GenomeBrowser | scaffold324.1:1854..19188 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | pfu_aug1.0_27098.1_33599 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| casein kinase ii subunit beta isoform 1 | GO:0005102 GO:0005737 GO:0005886 GO:0005956 GO:0008134 GO:0010862 GO:0019887 GO:0019904 GO:0031519 GO:0032927 GO:0033211 GO:0042802 GO:0043537 GO:0045859 GO:0061154 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13988.t3 | 2 | 1 | CK_II_beta | 15 | 100 | 0.0 | 302.7 | 8.0e-36 | 1.2e-31 | 109.6 |
| pfu_aug2.0_324.1_13988.t3 | 2 | 2 | CK_II_beta | 114 | 242 | 0.0 | 302.7 | 0.0 | 0.0 | 191.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13988.t3 | gi|742219371|ref|XP_010898769.1| | PREDICTED: casein kinase II subunit beta isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_324.1_13988.t3 | gi|478500191|ref|XP_004424419.1| | PREDICTED: casein kinase II subunit beta isoform 1 [Ceratotherium simum simum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13988.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13988.t1 atgatggtttatcttactgggatgagtagctcagaggaggtgtcatggatatcctggttctgtggtctgaggggcaatga attcttctgtgaggtagatgaagattatatacaggataagttcaacttaacaggcctaaatgaacaagtaccacactaca gacaagccctggatatgatactggacctagaaccagatgatgagaaccatacaatgttagaggacgaccatgaagctcag acattatatggacttatacatgctagatatatactgagcagtacaggtttacaagtcatgatcgagaaatggcagcaggg agattttgggtattgtccgagagtgtactgtgaaaatcagcccatgcttcctattggcctttctgatgtaccaggagagt ccatggttaagctatactgtccaaagtgccaggatgtttacacgcctaaatcttcacggcaccatcacactgacggagca tattttggtacaggcttccctcacatgttatttatggtacatcctgagtacagacctaaaagacctgcaaatcagttcat cccaaggctatacggcttcaagatccatcctctggcatacaacttacaatatcaggctgctggaaacttcaagatgccga tgagagggctcggacataacagcagcaaacgataa |
|
| Transcript ID | pfu_aug2.0_324.1_13988.t2 |
| Definition | - |
>pfu_aug2.0_324.1_13988.t2 atgatggtttatcttactgggatgagtagctcagaggaggtgtcatggatatcctggttctgtggtctgaggggcaatga attcttctgtgaggtagatgaagattatatacaggataagttcaacttaacaggcctaaatgaacaagtaccacactaca gacaagccctggatatgatactggacctagaaccagatgatgatttagaggacaatcctaatcaaagtgacctgatagag caagcagcagaaatgctgtacgggcttatacatgcccgctatattatgacaaatagaggcattgcccaaatgatcgagaa atggcagcagggagattttgggtattgtccgagagtgtactgtgaaaatcagcccatgcttcctattggcctttctgatg taccaggagagtccatggttaagctatactgtccaaagtgccaggatgtttacacgcctaaatcttcacggcaccatcac actgacggagcatattttggtacaggcttccctcacatgttatttatggtacatcctgagtacagacctaaaagacctgc aaatcagttcatcccaaggctatacggcttcaagatccatcctctggcatacaacttacaatatcaggctgctggaaact tcaagatgccgatgagagggctcggacataacagcagcaaacgataa |
|
| Transcript ID | pfu_aug2.0_324.1_13988.t3 |
| Definition | - |
>pfu_aug2.0_324.1_13988.t3 atgatggtttatcttactgggatgagtagctcagaggaggtgtcatggatatcctggttctgtggtctgaggggcaatga attcttctgtgaggtagatgaagattatatacaggataagttcaacttaacaggcctaaatgaacaagtaccacactaca gacaagccctggatatgatactggacctagaaccagatgatgagaaccatacaatgttagaggacgaccatgaagctcag acattatatggacttatacatgctagatatatactgagcagtacaggtttacaagtcatggatatagaaagtgttttgga atttacatatgatgatttagaggacaatcctaatcaaagtgacctgatagagcaagcagcagaaatgctgtacgggctta tacatgcccgctatattatgacaaatagaggcattgcccaaatgatcgagaaatggcagcagggagattttgggtattgt ccgagagtgtactgtgaaaatcagcccatgcttcctattggcctttctgatgtaccaggagagtccatggttaagctata ctgtccaaagtgccaggatgtttacacgcctaaatcttcacggcaccatcacactgacggagcatattttggtacaggct tccctcacatgttatttatggtacatcctgagtacagacctaaaagacctgcaaatcagttcatcccaaggctatacggc ttcaagatccatcctctggcatacaacttacaatatcaggctgctggaaacttcaagatgccgatgagagggctcggaca taacagcagcaaacgataa |
|
Protein
| Protein ID | pfu_aug2.0_324.1_13988.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13988.t1 MMVYLTGMSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDDENHTMLEDDHEAQ TLYGLIHARYILSSTGLQVMIEKWQQGDFGYCPRVYCENQPMLPIGLSDVPGESMVKLYCPKCQDVYTPKSSRHHHTDGA YFGTGFPHMLFMVHPEYRPKRPANQFIPRLYGFKIHPLAYNLQYQAAGNFKMPMRGLGHNSSKR |
|
| Protein ID | pfu_aug2.0_324.1_13988.t2 |
| Definition | - |
>pfu_aug2.0_324.1_13988.t2 MMVYLTGMSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDDDLEDNPNQSDLIE QAAEMLYGLIHARYIMTNRGIAQMIEKWQQGDFGYCPRVYCENQPMLPIGLSDVPGESMVKLYCPKCQDVYTPKSSRHHH TDGAYFGTGFPHMLFMVHPEYRPKRPANQFIPRLYGFKIHPLAYNLQYQAAGNFKMPMRGLGHNSSKR |
|
| Protein ID | pfu_aug2.0_324.1_13988.t3 |
| Definition | - |
>pfu_aug2.0_324.1_13988.t3 MMVYLTGMSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDDENHTMLEDDHEAQ TLYGLIHARYILSSTGLQVMDIESVLEFTYDDLEDNPNQSDLIEQAAEMLYGLIHARYIMTNRGIAQMIEKWQQGDFGYC PRVYCENQPMLPIGLSDVPGESMVKLYCPKCQDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFIPRLYG FKIHPLAYNLQYQAAGNFKMPMRGLGHNSSKR |
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