Gene
| Gene Model ID | pfu_aug2.0_324.1_13989 |
|---|---|
| Locus | scaffold324.1 : 52159 ... 55805 : - |
| To GenomeBrowser | scaffold324.1:52159..55805 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | pfu_aug1.0_4592.1_67025 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13989.t1 | 1 | 1 | IER | 2 | 262 | 2.5e-26 | 93.3 | 5.3e-30 | 7.8e-26 | 91.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13989.t1 | gi|241696779|ref|XP_002413098.1| | conserved hypothetical protein [Ixodes scapularis] | 6.0e-17 |
| pfu_aug2.0_324.1_13989.t1 | gi|676452978|ref|XP_009053206.1| | hypothetical protein LOTGIDRAFT_116083, partial [Lottia gigantea] | 9.0e-17 |
| pfu_aug2.0_324.1_13989.t1 | gi|585673707|ref|XP_006818459.1| | PREDICTED: immediate early response gene 5-like protein-like [Saccoglossus kowalevskii] | 4.0e-16 |
| pfu_aug2.0_324.1_13989.t1 | gi|524917512|ref|XP_005113510.1| | PREDICTED: uncharacterized protein DDB_G0271670-like [Aplysia californica] | 5.0e-15 |
| pfu_aug2.0_324.1_13989.t1 | gi|390337042|ref|XP_003724475.1| | PREDICTED: immediate early response gene 5-like protein [Strongylocentrotus purpuratus] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13989.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13989.t1 atgaacaccgatgcacagaggttgattgctctttcccttggaaaaatagcagcatccagacaacaacgtggagggattaa tttacataaaaatttactcgtggcgagtgtgttgcataaagcaaggaccacttacatgatggagaatctacaaacggttt tagcaaacaggaaagctcaatcagaagcaagggacattgctcttcagaggcagaaatctcagataagtagcgagaactct tcacaattaaattctacgaattccaaagataaagcacgtcatgacgcgcagacggaagccaaaaggtcacgagttgaact tgaaacacccagagtcagtgaagcgagtaaacaagaggaggacaaagaaaatgcccctcccaagtgtgctagactggaat gtgaaaacacaaaggaggataaattaccccaggacattaacaatgaggatagttgtagtacccccttacaatcaggacag tgcactcagaatattggggtcagtgattacgtcagagactcgggatgcgcaaggtgtgctgtgaaacgaaggcgtccatc aagcgatgcggagacacaagaggattatgaaaatgaacttgaagttaaaaaagcgagattggaaccggaggttgaaagtg aacatatatctcaggactcatctgtagaacagatgcaaaccgaaagttctcaaattacaaacttagtcagtattttcaat gcagggttcggcggtctttgttccgattccgagaaagacccttgtgagaaagacagtaacaataacgagaagtcattcac ccaacctcaggataacatattctataatgcagtacaatcaatgaacagcttctcaatgaaagacaatgcctccgtgtctt gtgctactcagatgattgacagtaaaatagaagctgtttctatagcgacgccgattgcattgaccgtttga |
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Protein
| Protein ID | pfu_aug2.0_324.1_13989.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13989.t1 MNTDAQRLIALSLGKIAASRQQRGGINLHKNLLVASVLHKARTTYMMENLQTVLANRKAQSEARDIALQRQKSQISSENS SQLNSTNSKDKARHDAQTEAKRSRVELETPRVSEASKQEEDKENAPPKCARLECENTKEDKLPQDINNEDSCSTPLQSGQ CTQNIGVSDYVRDSGCARCAVKRRRPSSDAETQEDYENELEVKKARLEPEVESEHISQDSSVEQMQTESSQITNLVSIFN AGFGGLCSDSEKDPCEKDSNNNEKSFTQPQDNIFYNAVQSMNSFSMKDNASVSCATQMIDSKIEAVSIATPIALTV |
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