Gene
| Gene Model ID | pfu_aug2.0_324.1_13991 |
|---|---|
| Locus | scaffold324.1 : 105594 ... 130285 : - |
| To GenomeBrowser | scaffold324.1:105594..130285 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | pfu_aug1.0_6710.1_09408 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cre-ncs-3 protein | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13991.t1 | 5 | 1 | EF-hand_6 | 177 | 191 | 2.5e-15 | 54.9 | 1.7 | 3500.0 | -1.6 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 1 | EF-hand_1 | 216 | 231 | 3.0e-18 | 63.6 | 0.083 | 180.0 | 1.8 |
| pfu_aug2.0_324.1_13991.t1 | 3 | 1 | EF-hand_7 | 216 | 226 | 4.3e-16 | 58.8 | 0.4 | 840.0 | 0.2 |
| pfu_aug2.0_324.1_13991.t1 | 5 | 2 | EF-hand_6 | 216 | 230 | 2.5e-15 | 54.9 | 0.26 | 550.0 | 0.9 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 1 | EF-hand_5 | 219 | 225 | 2.0e-14 | 52.1 | 0.85 | 1800.0 | -1.5 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 1 | EF-hand_8 | 219 | 229 | 9.1e-12 | 44.4 | 1.2 | 2500.0 | -1.8 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 2 | EF-hand_8 | 275 | 290 | 9.1e-12 | 44.4 | 0.76 | 1600.0 | -1.3 |
| pfu_aug2.0_324.1_13991.t1 | 3 | 2 | EF-hand_7 | 325 | 337 | 4.3e-16 | 58.8 | 0.019 | 41.0 | 4.4 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 2 | EF-hand_1 | 326 | 339 | 3.0e-18 | 63.6 | 0.00031 | 0.66 | 9.4 |
| pfu_aug2.0_324.1_13991.t1 | 5 | 3 | EF-hand_6 | 326 | 339 | 2.5e-15 | 54.9 | 0.0061 | 13.0 | 6.0 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 2 | EF-hand_5 | 326 | 336 | 2.0e-14 | 52.1 | 0.0081 | 17.0 | 4.9 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 3 | EF-hand_8 | 326 | 370 | 9.1e-12 | 44.4 | 3.6e-09 | 7.5e-06 | 25.4 |
| pfu_aug2.0_324.1_13991.t1 | 3 | 3 | EF-hand_7 | 349 | 420 | 4.3e-16 | 58.8 | 9.7e-18 | 2.1e-14 | 53.4 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 3 | EF-hand_1 | 350 | 374 | 3.0e-18 | 63.6 | 8.3e-10 | 1.8e-06 | 26.8 |
| pfu_aug2.0_324.1_13991.t1 | 5 | 4 | EF-hand_6 | 353 | 374 | 2.5e-15 | 54.9 | 7.5e-08 | 0.00016 | 21.2 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 3 | EF-hand_5 | 353 | 371 | 2.0e-14 | 52.1 | 4.8e-07 | 0.001 | 18.3 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 4 | EF-hand_1 | 398 | 421 | 3.0e-18 | 63.6 | 5.5e-09 | 1.2e-05 | 24.2 |
| pfu_aug2.0_324.1_13991.t1 | 5 | 5 | EF-hand_6 | 398 | 420 | 2.5e-15 | 54.9 | 3.3e-07 | 0.00069 | 19.2 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 4 | EF-hand_5 | 399 | 420 | 2.0e-14 | 52.1 | 1.2e-09 | 2.6e-06 | 26.5 |
| pfu_aug2.0_324.1_13991.t1 | 4 | 4 | EF-hand_8 | 399 | 419 | 9.1e-12 | 44.4 | 2.0e-06 | 0.0042 | 16.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13991.t1 | gi|585677507|ref|XP_006819152.1| | PREDICTED: calcium-binding protein NCS-1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_324.1_13991.t1 | gi|198431608|ref|XP_002130539.1| | PREDICTED: neuronal calcium sensor 1-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_324.1_13991.t1 | gi|260811025|ref|XP_002600223.1| | hypothetical protein BRAFLDRAFT_66728 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_324.1_13991.t1 | gi|156359578|ref|XP_001624844.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_324.1_13991.t1 | gi|25150298|ref|NP_508201.2| | NCS-3 [Caenorhabditis elegans] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13991.t1 atgcgaggaatacccggagcgagaccaacagagggagaaatccctcccatgcaggtatctacaacggaactgaattacag tgaggcacagaaactttacattttgggggcaaaacttgacaattttcgcacgattggaccttggcatcatgttgacgcta aatacttggataatatcgtgtacagattggcgtctcccatcgccagaccgtgtagtcgaatgcacgacgaaggcgcttgg gctgccgaggacaccgctttcctgcactacccccgaccagtgtccagcatccagagcgaaccccctaaatatggttcaag accgggagggtcatcggtgaaaagcggatattccctcccgtgcatgcgccagaatggtcgccgagaggacagaaatgccg gaagtcctctcagtacgatcgattcaaacgaattagacgggattgtaaatcgtatgacgagaccaaccgtagcgagccgc ggaggagttgacatcgccgagaaatttgaaaacaaagactatgtttacggatctaaaactgtgtcgaccgaggatttgaa caaaattgttggtcgaatgaccagaccaactgttgctagcacgggaggtaaaggaattccgcggaaatacacagatttcg tgtacggcgataagagagtttcgagggatgaatttgatgatatcgtttcacgaatgacgaagccgacgatcgcgagtcgc ggtggcgtagatatcgaaaacaaagttccggttgcgtacaagccgccaccaacgacgaaaacaaatcctgtagttcccgg gctcaaaggtaagcaggaaagacttttgaaaaagcgagtgaacgctcaagaattggacgatatagtcagtcgattgacaa aaatgacgccagcgtacaaggccaagttcgccctgaatccacacgtatggaaggatgagtctcctaagggacccgcgttc aaccgctcagctacagacggttacatttcatttagagaattcatcacagcattgtccatcacatcacgtggttctctcga cgaaaaattagactgggcctttagtttgtatgatcttgacaatgatggctacatcaccaaagaagagatggtgaatattg ttgacgctatatacagtatggtagggaacctcctggacctacccaaggatgaggacacacccatcaaacgggtggagaaa atatttgctcaaatggacacaaatagagatggtcgattgacgaaagatgaattccgggagggttccaagtgcgatccttg gattgtcgaggcattgtccacgccccataggtag |
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Protein
| Protein ID | pfu_aug2.0_324.1_13991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13991.t1 MRGIPGARPTEGEIPPMQVSTTELNYSEAQKLYILGAKLDNFRTIGPWHHVDAKYLDNIVYRLASPIARPCSRMHDEGAW AAEDTAFLHYPRPVSSIQSEPPKYGSRPGGSSVKSGYSLPCMRQNGRREDRNAGSPLSTIDSNELDGIVNRMTRPTVASR GGVDIAEKFENKDYVYGSKTVSTEDLNKIVGRMTRPTVASTGGKGIPRKYTDFVYGDKRVSRDEFDDIVSRMTKPTIASR GGVDIENKVPVAYKPPPTTKTNPVVPGLKGKQERLLKKRVNAQELDDIVSRLTKMTPAYKAKFALNPHVWKDESPKGPAF NRSATDGYISFREFITALSITSRGSLDEKLDWAFSLYDLDNDGYITKEEMVNIVDAIYSMVGNLLDLPKDEDTPIKRVEK IFAQMDTNRDGRLTKDEFREGSKCDPWIVEALSTPHR |
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