Gene
| Gene Model ID | pfu_aug2.0_324.1_13997 |
|---|---|
| Locus | scaffold324.1 : 273998 ... 276399 : - |
| To GenomeBrowser | scaffold324.1:273998..276399 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | pfu_aug1.0_20546.1_33113 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13997.t1 | 4 | 1 | EF-hand_6 | 42 | 66 | 2.7e-09 | 36.1 | 0.0018 | 4.5 | 7.4 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 1 | EF-hand_1 | 43 | 65 | 1.1e-14 | 52.4 | 8.5e-05 | 0.21 | 10.9 |
| pfu_aug2.0_324.1_13997.t1 | 3 | 1 | EF-hand_7 | 43 | 65 | 2.6e-11 | 43.4 | 0.00011 | 0.27 | 11.4 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 1 | EF-hand_5 | 48 | 54 | 5.9e-09 | 34.8 | 0.04 | 99.0 | 2.5 |
| pfu_aug2.0_324.1_13997.t1 | 3 | 1 | EF-hand_8 | 49 | 82 | 6.2e-07 | 28.9 | 0.00016 | 0.39 | 10.3 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 2 | EF-hand_1 | 62 | 85 | 1.1e-14 | 52.4 | 1.2e-06 | 0.003 | 16.7 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 2 | EF-hand_6 | 62 | 85 | 2.7e-09 | 36.1 | 5.7e-05 | 0.14 | 12.1 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 2 | EF-hand_5 | 65 | 82 | 5.9e-09 | 34.8 | 0.00044 | 1.1 | 8.7 |
| pfu_aug2.0_324.1_13997.t1 | 3 | 2 | EF-hand_7 | 66 | 116 | 2.6e-11 | 43.4 | 6.7e-08 | 0.00016 | 21.6 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 3 | EF-hand_1 | 97 | 116 | 1.1e-14 | 52.4 | 1.9e-06 | 0.0047 | 16.1 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 3 | EF-hand_6 | 99 | 116 | 2.7e-09 | 36.1 | 3.4e-05 | 0.085 | 12.7 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 3 | EF-hand_5 | 99 | 115 | 5.9e-09 | 34.8 | 1.6e-05 | 0.038 | 13.3 |
| pfu_aug2.0_324.1_13997.t1 | 3 | 2 | EF-hand_8 | 99 | 115 | 6.2e-07 | 28.9 | 0.00036 | 0.89 | 9.2 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 4 | EF-hand_1 | 121 | 142 | 1.1e-14 | 52.4 | 4.9e-06 | 0.012 | 14.8 |
| pfu_aug2.0_324.1_13997.t1 | 3 | 3 | EF-hand_7 | 121 | 144 | 2.6e-11 | 43.4 | 6.4e-05 | 0.16 | 12.1 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 4 | EF-hand_6 | 121 | 141 | 2.7e-09 | 36.1 | 0.00043 | 1.1 | 9.3 |
| pfu_aug2.0_324.1_13997.t1 | 4 | 4 | EF-hand_5 | 121 | 136 | 5.9e-09 | 34.8 | 0.00072 | 1.8 | 8.0 |
| pfu_aug2.0_324.1_13997.t1 | 3 | 3 | EF-hand_8 | 122 | 141 | 6.2e-07 | 28.9 | 0.00028 | 0.7 | 9.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13997.t1 | gi|676435535|ref|XP_009047588.1| | hypothetical protein LOTGIDRAFT_238177 [Lottia gigantea] | 2.0e-34 |
| pfu_aug2.0_324.1_13997.t1 | gi|676486801|ref|XP_009064091.1| | hypothetical protein LOTGIDRAFT_235852 [Lottia gigantea] | 1.0e-21 |
| pfu_aug2.0_324.1_13997.t1 | gi|676444426|ref|XP_009050425.1| | hypothetical protein LOTGIDRAFT_158735 [Lottia gigantea] | 1.0e-13 |
| pfu_aug2.0_324.1_13997.t1 | gi|676444432|ref|XP_009050427.1| | hypothetical protein LOTGIDRAFT_158737 [Lottia gigantea] | 1.0e-12 |
| pfu_aug2.0_324.1_13997.t1 | gi|676463062|ref|XP_009056475.1| | hypothetical protein LOTGIDRAFT_232909 [Lottia gigantea] | 7.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13997.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13997.t1 atgttcgccaaaactctcgtagtgttactttcccttgcgtcagcgctaggagcaccaaccactacacagtccacaggtca ctccgctctagataactttaaagcgctcgtcaggaaacagataacggctctctggacacgggtggatacagaccatgacg gccattttgaaaagaacgacatgcaccacattttggacgactatgacgatgataaaaatggtcaagtgtcaaatgccgag tttgttcatcattttgctgcaagtaacccagaccttaacgtgatagcaaagggactgttcctggagtttgatatggatca tgatggtgaaatcacctacacagacttggacttgtactaccagaaaatagatacaaacgacaatgggcatgtcgaagaat cagaattcgtccactacttcactgagattttcaccatcctgttcgtcattcagcttaaccaacaagccaccactactgcc atagttcatccagctgctgtaggaaaataa |
|
Protein
| Protein ID | pfu_aug2.0_324.1_13997.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13997.t1 MFAKTLVVLLSLASALGAPTTTQSTGHSALDNFKALVRKQITALWTRVDTDHDGHFEKNDMHHILDDYDDDKNGQVSNAE FVHHFAASNPDLNVIAKGLFLEFDMDHDGEITYTDLDLYYQKIDTNDNGHVEESEFVHYFTEIFTILFVIQLNQQATTTA IVHPAAVGK |
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