Gene
| Gene Model ID | pfu_aug2.0_324.1_13998 |
|---|---|
| Locus | scaffold324.1 : 283130 ... 295812 : + |
| To GenomeBrowser | scaffold324.1:283130..295812 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| snare-associated protein snapin | GO:0006886 GO:0031083 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13998.t1 | 1 | 1 | Snapin_Pallidin | 19 | 106 | 9.7e-27 | 93.1 | 1.5e-29 | 1.3e-26 | 92.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13998.t1 | gi|676427100|ref|XP_009044837.1| | hypothetical protein LOTGIDRAFT_223864 [Lottia gigantea] | 4.06377e-44 |
| pfu_aug2.0_324.1_13998.t1 | gi|524863992|ref|XP_005088835.1| | PREDICTED: SNARE-associated protein Snapin-like isoform X1 [Aplysia californica] | 4.00001e-41 |
| pfu_aug2.0_324.1_13998.t1 | gi|260810887|ref|XP_002600154.1| | hypothetical protein BRAFLDRAFT_118250 [Branchiostoma floridae] | 2.0e-34 |
| pfu_aug2.0_324.1_13998.t1 | gi|156365612|ref|XP_001626738.1| | predicted protein [Nematostella vectensis] | 1.0e-29 |
| pfu_aug2.0_324.1_13998.t1 | gi|410928694|ref|XP_003977735.1| | PREDICTED: SNARE-associated protein Snapin [Takifugu rubripes] | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13998.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13998.t1 atggaaaaagaaaaattggtacaaaataacgaaaaacctctggataacaacacaagagatgcattatctaacggccttat tgatcttctaaaaccctctgtcgaagaaatcgacgatcgcgtcaaaactgtaagggaaagtcaagttgagttgagacaac aaatagacagccttgcagatgacttaaaggctattgctgaacagcaagcagtgccagtggatcttgagccatatgtgaag aaactgaataattccagacgtagagttatgctcgtcaataatatattacagaatgttcaggatcgtatccgtggtataga atgtgcttga |
|
Protein
| Protein ID | pfu_aug2.0_324.1_13998.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13998.t1 MEKEKLVQNNEKPLDNNTRDALSNGLIDLLKPSVEEIDDRVKTVRESQVELRQQIDSLADDLKAIAEQQAVPVDLEPYVK KLNNSRRRVMLVNNILQNVQDRIRGIECA |
|