Gene
| Gene Model ID | pfu_aug2.0_324.1_13999 |
|---|---|
| Locus | scaffold324.1 : 297828 ... 301409 : - |
| To GenomeBrowser | scaffold324.1:297828..301409 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | pfu_aug1.0_24680.1_26193 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| von willebrand factor type egf and pentraxin domain-containing protein 1-like | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13999.t1 | 2 | 1 | Sushi | 13 | 51 | 2.9e-13 | 49.9 | 7.0e-09 | 5.2e-05 | 23.5 |
| pfu_aug2.0_324.1_13999.t1 | 2 | 2 | Sushi | 55 | 106 | 2.9e-13 | 49.9 | 1.4e-10 | 1.0e-06 | 28.9 |
| pfu_aug2.0_324.1_13999.t1 | 2 | 1 | Lectin_C | 96 | 96 | 5.0e-11 | 43.1 | 0.25 | 1900.0 | -0.5 |
| pfu_aug2.0_324.1_13999.t1 | 2 | 2 | Lectin_C | 135 | 239 | 5.0e-11 | 43.1 | 6.7e-15 | 5.0e-11 | 43.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13999.t1 | gi|260819826|ref|XP_002605237.1| | hypothetical protein BRAFLDRAFT_92290 [Branchiostoma floridae] | 4.0e-15 |
| pfu_aug2.0_324.1_13999.t1 | gi|699256287|ref|XP_002119830.2| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like, partial [Ciona intestinalis] | 4.0e-12 |
| pfu_aug2.0_324.1_13999.t1 | gi|383855342|ref|XP_003703173.1| | PREDICTED: uncharacterized protein LOC100877094 [Megachile rotundata] | 1.0e-11 |
| pfu_aug2.0_324.1_13999.t1 | gi|524872028|ref|XP_005092781.1| | PREDICTED: uncharacterized protein LOC101854311 [Aplysia californica] | 1.0e-11 |
| pfu_aug2.0_324.1_13999.t1 | gi|512933623|ref|XP_004932837.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Bombyx mori] | 1.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13999.t1 atgccgcctatcttgatcaatggagcctcttcttacactaccacaaccctaaactctgtggctacatacacatgttcttc caattatatattagttggatcatccactttggcctgtaccacgtccggttggtcaacgcttacgacctcctgtatcatag actgcggcgaaccaacagcgaccgtagctaatgctgctcttggctctggttcaacagttcagggatcaagtagaatttat acgtgtaattctgggtatcggtcatctaatgctgctacctcaatagtttgtcagtctaatggacagtggtcatttccgac attccaatgcatagacatatgtcctggtggatggatgagggacgatacacatagatcgtgttattacgtgtacacatacc tacaacagtatcatgatgcaacatcctattgtttatcttctggagccaatctgttgtccttacagaccgtggaaaaaaga gacgctttcttcgcatatctgcaaaatgtattccatcatcagtcgatctacatcggagctaggactgtcgacccggattc tggaatttggtactggccggatggtagttattttactgaccagtcgctgatctggaaacatgacgaacctagagatgacg atgaatgtgcattcgtacatcatgaaaaggaaatcaagagcactagttgtgatgtagacatgttatttgcatgtgaaatt gcattttag |
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Protein
| Protein ID | pfu_aug2.0_324.1_13999.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13999.t1 MPPILINGASSYTTTTLNSVATYTCSSNYILVGSSTLACTTSGWSTLTTSCIIDCGEPTATVANAALGSGSTVQGSSRIY TCNSGYRSSNAATSIVCQSNGQWSFPTFQCIDICPGGWMRDDTHRSCYYVYTYLQQYHDATSYCLSSGANLLSLQTVEKR DAFFAYLQNVFHHQSIYIGARTVDPDSGIWYWPDGSYFTDQSLIWKHDEPRDDDECAFVHHEKEIKSTSCDVDMLFACEI AF |
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