Gene
| Gene Model ID | pfu_aug2.0_324.1_14001 |
|---|---|
| Locus | scaffold324.1 : 325060 ... 333273 : + |
| To GenomeBrowser | scaffold324.1:325060..333273 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| n-acetylneuraminate lyase isoform x1 | GO:0008747 GO:0019262 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_14001.t1 | 1 | 1 | DHDPS | 10 | 302 | 0.0 | 197.7 | 0.0 | 0.0 | 197.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_14001.t1 | gi|62078697|ref|NP_001014006.1| | N-acetylneuraminate lyase [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_324.1_14001.t1 | gi|533119233|ref|XP_005375069.1| | PREDICTED: N-acetylneuraminate lyase isoform X1 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_324.1_14001.t1 | gi|507696872|ref|XP_004643511.1| | PREDICTED: N-acetylneuraminate lyase [Octodon degus] | 0.0 |
| pfu_aug2.0_324.1_14001.t1 | gi|731252054|ref|XP_010638833.1| | PREDICTED: N-acetylneuraminate lyase isoform X1 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_324.1_14001.t1 | gi|348578402|ref|XP_003474972.1| | PREDICTED: N-acetylneuraminate lyase [Cavia porcellus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_14001.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_14001.t1 atggcacagattgggagcttttggttagagggtctagtaccagccctctttactccattcaacaaaaagggagaactgga attatctgtgatatcaaagtactgtgaattcctgctgaataatgatattcgtgctgtgtacgtgaatgggaccacaggag aaggtacgtcaatgaccaaagaggagagacaagccatagttgaggaatggatcaaggtggctaaaggcagactgaaagtt gttgtacaagttggatcactgcatttgaaagagagtaaagaattggccaaacattcagccacagtcggagccgatgccat cgcaactttaccaccgcttttcttcaagccacaaaacatagattcgctgattacttactgtaaaggagtggcttcagaag cccctaccctacctttttactactaccatctcccgatgtttacaggcgttacactcaacatggaagattttatgaggagg gccaaaacacagattcccagcttaagagggatcaaattttcaaaccaggaccttgtagatatgattgttgtgaaatatgc cggagacttcaacatattgtatgggacagatagtcaattattggcgggaatgacgaccggtgcccatggcgctataggga gtaactataactacatgcctaaagtctttataaggatgtttaaggatattgaagctaatgaccttgagagtgctaggaaa gaacaacttaaatgtcaacaactacgtagaatcatagtcaaatacggaaacttattaggtggaacagttgcatccatgaa acccttaatgtcattggtaggtgtggatgtaggcccgccaagggaaccaatgagagaaatgacagaagaagaaatgaaaa tgttcttgaatgaagttaaggaacttggctttataaattcagattcagctaactttgcttaa |
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Protein
| Protein ID | pfu_aug2.0_324.1_14001.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_14001.t1 MAQIGSFWLEGLVPALFTPFNKKGELELSVISKYCEFLLNNDIRAVYVNGTTGEGTSMTKEERQAIVEEWIKVAKGRLKV VVQVGSLHLKESKELAKHSATVGADAIATLPPLFFKPQNIDSLITYCKGVASEAPTLPFYYYHLPMFTGVTLNMEDFMRR AKTQIPSLRGIKFSNQDLVDMIVVKYAGDFNILYGTDSQLLAGMTTGAHGAIGSNYNYMPKVFIRMFKDIEANDLESARK EQLKCQQLRRIIVKYGNLLGGTVASMKPLMSLVGVDVGPPREPMREMTEEEMKMFLNEVKELGFINSDSANFA |
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