Gene
| Gene Model ID | pfu_aug2.0_3240.1_02362 |
|---|---|
| Locus | scaffold3240.1 : 3246 ... 12911 : + |
| To GenomeBrowser | scaffold3240.1:3246..12911 |
| Genes list of scaffold | scaffold3240.1 |
| Synonym | pfu_aug1.0_371.1_07491 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3240.1_02362.t1 | 1 | 1 | Git3 | 45 | 230 | 4.3e-08 | 32.9 | 9.5e-12 | 7.1e-08 | 32.2 |
| pfu_aug2.0_3240.1_02362.t1 | 1 | 1 | 7tm_1 | 80 | 294 | 3.1e-12 | 46.1 | 4.2e-16 | 3.1e-12 | 46.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3240.1_02362.t1 | gi|260795559|ref|XP_002592772.1| | hypothetical protein BRAFLDRAFT_117719 [Branchiostoma floridae] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_3240.1_02362.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3240.1_02362.t1 atgtgtctgaactggtcaggaccagatagtaaaatggtttcagacaacttgaccattaccagaccagctgaccaaccgaa ggatggttatgacatcccggtctatggtttggccaatggtcagttctacagtctccatgttccagctcttacgttcatct tcctcagtctcacctcagccatagctgttttggtagcttccttcaagcttcaaagttatcggagtttcttttcctggaca aagagtgagcgttttgtagtttatcttgccgtctgtgatggtcttttcagtatggctcattccatggatcacctgcacat agttataaccaaaaaccacgtgtaccctcgcggactttgtaagttctacggatttatgctgactgtattcatcactgcgc agaacttgatggtcaacatcgtcgctttcaatgcattcatacttatttactacagaaagaatgttgacttaggccggtat gattatagactactgttgtatacattcggaactccattcgtcggtgcttgcattgctgttggactaggaacactcggatc aaacggtgctttttgttattttgatggggtgaaaggtgagctggctaacatcttcttcaccacaatccctctgattctga tactatgtatgaacattgtactgtactgtctcacccttcatcgcatcaacacggaagaagaacttctaaaggaatcactc ggcaatggcagagtcaacagatcccataaggccgcaagaaacatgtctatgtttgtggtagccttcttcgtgcagtggtg tcccctcacggtgtatggactttggcagctgattgcccccgtaccacagcttctgtttcagatggtaaccacgttctcta atatcggcgggattcttaacgggatagtgttcatcatcctgaaaaggcgcaagctaatgtcacacaaggaagggaaggaa tcatcctctgtacacatgaaagacatttctattaacttagataacactgtaaaggacaatgcggatactggtcagagatc ggaaaaattagatgatgatgatgatgaagataacatcagaaattcaattgctttttcagactattga |
|
Protein
| Protein ID | pfu_aug2.0_3240.1_02362.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3240.1_02362.t1 MCLNWSGPDSKMVSDNLTITRPADQPKDGYDIPVYGLANGQFYSLHVPALTFIFLSLTSAIAVLVASFKLQSYRSFFSWT KSERFVVYLAVCDGLFSMAHSMDHLHIVITKNHVYPRGLCKFYGFMLTVFITAQNLMVNIVAFNAFILIYYRKNVDLGRY DYRLLLYTFGTPFVGACIAVGLGTLGSNGAFCYFDGVKGELANIFFTTIPLILILCMNIVLYCLTLHRINTEEELLKESL GNGRVNRSHKAARNMSMFVVAFFVQWCPLTVYGLWQLIAPVPQLLFQMVTTFSNIGGILNGIVFIILKRRKLMSHKEGKE SSSVHMKDISINLDNTVKDNADTGQRSEKLDDDDDEDNIRNSIAFSDY |
|