Gene
| Gene Model ID | pfu_aug2.0_3247.1_25692 |
|---|---|
| Locus | scaffold3247.1 : 35669 ... 37195 : - |
| To GenomeBrowser | scaffold3247.1:35669..37195 |
| Genes list of scaffold | scaffold3247.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3247.1_25692.t1 | 2 | 1 | Lectin_C | 41 | 147 | 4.7e-20 | 72.1 | 1.3e-19 | 2.0e-15 | 57.3 |
| pfu_aug2.0_3247.1_25692.t1 | 2 | 2 | Lectin_C | 178 | 280 | 4.7e-20 | 72.1 | 5.5e-06 | 0.081 | 13.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3247.1_25692.t1 | gi|260789369|ref|XP_002589719.1| | hypothetical protein BRAFLDRAFT_100843 [Branchiostoma floridae] | 1.0e-13 |
| pfu_aug2.0_3247.1_25692.t1 | gi|260819110|ref|XP_002604880.1| | hypothetical protein BRAFLDRAFT_171473 [Branchiostoma floridae] | 1.0e-13 |
| pfu_aug2.0_3247.1_25692.t1 | gi|260787747|ref|XP_002588913.1| | hypothetical protein BRAFLDRAFT_89101 [Branchiostoma floridae] | 3.0e-13 |
| pfu_aug2.0_3247.1_25692.t1 | gi|260805232|ref|XP_002597491.1| | hypothetical protein BRAFLDRAFT_223066 [Branchiostoma floridae] | 6.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_3247.1_25692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3247.1_25692.t1 atgacggctatgaggattttcattttcctttatatgtttgatgttgttacgaaaacgctgtccctttgtgacagtggctg gatagaagaagcgccactatgctacaaagtatttaatgaatataagacttttagggacgcaataaacttgtgtcagcaag aagaagctgatcttatgatgccgataacagacagggagaatgcaataatggtgaatttacgggcaacgtcaagcaacaat gaggcttggatcggcttgagaaatacgtcttttgacacaacaacacgcgaatatacccatgaatggttagatggaagcgc attgacatacagcaattggagaaacgattatgaccgtggatacccatgtgttttccttcatgccaatagtaaatggaggg gcaaagaatgcaatcaagaaatgctagtaatctgtcagaagatgaaaactgtgacagaatgccctactggctggtaccgt tctttcagtaggaaaagttgttaccgtcatgtaggtagtgggacaattattgatgccattcaacaatgtagctttatcga taatgtagcagcagaggtcgctatgccgaaaacccaacagcaaaatggtttgctaaatttcttaatgaaactttaccttc taactaatatccatatcggattagaatctaccttactaacagactggacatggtttagtggagagaagcttgccgataca ggatatagtgcttggatttctggaactccttttccatttattgttcaatatgctacgatgatgaataagaaatggaccaa tcattacggtccttcaatagctgcatctataatttgccaatgccatctgctgacagaaaaccaaactccattatccggta gagcctattgtgcaatgcctgtagtttataataccgtgccactcgcacaggaaacaacacagttgcaccaaacaactgtt acacgtgaaatcacagatactacacaacctttaacagaagatactactacagaaaactccttcagtacgtccctatcctc ttcgattacctcagcaccgaacgcctgtgtccaggagtgtccttgttaccacaactctgaaaactctttgaccagtaatg cacttgaccaacggatcagggacatcaagaccaacctcactgtcgagaaatctattttatcaaagacaatacgaaagctg acatgcgcggaggatccacgtgtgagcagcagatatattggttatcttggagcagttatgataactgtagtttttggtct attaatcttaatggactgttttacattggctacatacaaatgtctatcataa |
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Protein
| Protein ID | pfu_aug2.0_3247.1_25692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3247.1_25692.t1 MTAMRIFIFLYMFDVVTKTLSLCDSGWIEEAPLCYKVFNEYKTFRDAINLCQQEEADLMMPITDRENAIMVNLRATSSNN EAWIGLRNTSFDTTTREYTHEWLDGSALTYSNWRNDYDRGYPCVFLHANSKWRGKECNQEMLVICQKMKTVTECPTGWYR SFSRKSCYRHVGSGTIIDAIQQCSFIDNVAAEVAMPKTQQQNGLLNFLMKLYLLTNIHIGLESTLLTDWTWFSGEKLADT GYSAWISGTPFPFIVQYATMMNKKWTNHYGPSIAASIICQCHLLTENQTPLSGRAYCAMPVVYNTVPLAQETTQLHQTTV TREITDTTQPLTEDTTTENSFSTSLSSSITSAPNACVQECPCYHNSENSLTSNALDQRIRDIKTNLTVEKSILSKTIRKL TCAEDPRVSSRYIGYLGAVMITVVFGLLILMDCFTLATYKCLS |
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