Gene
| Gene Model ID | pfu_aug2.0_3249.1_32424 |
|---|---|
| Locus | scaffold3249.1 : 26378 ... 49095 : - |
| To GenomeBrowser | scaffold3249.1:26378..49095 |
| Genes list of scaffold | scaffold3249.1 |
| Synonym | pfu_aug1.0_4552.1_44962 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3249.1_32424.t1 | 1 | 1 | Fringe | 198 | 364 | 1.3e-13 | 50.7 | 6.4e-17 | 4.7e-13 | 48.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3249.1_32424.t1 | gi|676496857|ref|XP_009067352.1| | hypothetical protein LOTGIDRAFT_198406 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3249.1_32424.t1 | gi|542143559|ref|XP_005480860.1| | PREDICTED: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_3249.1_32424.t1 | gi|224044959|ref|XP_002197545.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3249.1_32424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3249.1_32424.t1 atgttgatgaataatgaggacagagcaatttcattggccagagataaaaaaaatcttataagacttgtattaaggataga gcagtgctctatcgctaatacagtcttatgtgtttttgaaaatcctatcatacagtgtattaagggtgtacacacgcatg gaccagacatgcacagtaaaattccccgctattatgtaacaagtcctccttcattagaagtacaaattccacccactgat gattgcgttggtttagaaattaaagcaaacagttcctggtggaggactaccaaaaggtcgatggctcgaatgcgttaccg taaagtggacacagatctatgtagaaggtttatccgcaaagtttgccatgccttcctgttgactatgatcttattggtga ttctgagcaagaacattgattttttactaagggtgaggtccgtggtatggggagtatctccgaatatccctgatgatttc caaagattacccatacattctctgtcctcgggatatcagaacgagtctaccatcatagtggaccgcacggtggctgttgc attgtatcataaagtgaaagttttatgtctgatccctacaactcagcgtcacatggacatggggcgtgttcgaatagtca actcaacatgggcaaggcgatgtaacaaagtattctatataacttgtccgagtgaacatcataaggatttcattaataca tgcatgtttcaagaaacaaaggaaactcttttgaataaaattacatatgcattatttcatgtgtacaaatattatctcca ggattttgattggatattaaaggcagatgatgacacgtatgttgtcatggagaatttaagatttatgttatcaagtcata gtagtaatgaaccaggctacattggctaccattttcgagcacaccttactcacggttatcactctgggggtgccgggttt gtcatcagtaggaagggactggatcagatgatgacacagggttatgagaggggattatgtaccataactggcgaagtaga agatatggaaatagggaaatgtttacagatagccggcgtccccgtgctgagctccttggataagtttgacagacagactt ttcatcctgaggattttgtacggcacatcacaggttcctatccagcatggttggttagatgggcaagagaagacatggca gggggaacagaatgctgtagtcagttcgtgatcagtttccatcatcttgatatatactctacgatagtactacatcagct attatatagaaccagtgtgtatggaatacgaacaccagaaaatatacctggcatgtttcctgtcagaaagatccgtccat tgaagcgttttgtgataccttga |
|
Protein
| Protein ID | pfu_aug2.0_3249.1_32424.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3249.1_32424.t1 MLMNNEDRAISLARDKKNLIRLVLRIEQCSIANTVLCVFENPIIQCIKGVHTHGPDMHSKIPRYYVTSPPSLEVQIPPTD DCVGLEIKANSSWWRTTKRSMARMRYRKVDTDLCRRFIRKVCHAFLLTMILLVILSKNIDFLLRVRSVVWGVSPNIPDDF QRLPIHSLSSGYQNESTIIVDRTVAVALYHKVKVLCLIPTTQRHMDMGRVRIVNSTWARRCNKVFYITCPSEHHKDFINT CMFQETKETLLNKITYALFHVYKYYLQDFDWILKADDDTYVVMENLRFMLSSHSSNEPGYIGYHFRAHLTHGYHSGGAGF VISRKGLDQMMTQGYERGLCTITGEVEDMEIGKCLQIAGVPVLSSLDKFDRQTFHPEDFVRHITGSYPAWLVRWAREDMA GGTECCSQFVISFHHLDIYSTIVLHQLLYRTSVYGIRTPENIPGMFPVRKIRPLKRFVIP |
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