Gene
| Gene Model ID | pfu_aug2.0_325.1_17282 |
|---|---|
| Locus | scaffold325.1 : 6025 ... 15915 : - |
| To GenomeBrowser | scaffold325.1:6025..15915 |
| Genes list of scaffold | scaffold325.1 |
| Synonym | pfu_aug1.0_4670.1_30763 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| target of rapamycin complex subunit lst8 | GO:0005737 GO:0030838 GO:0032008 GO:0050731 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_325.1_17282.t1 | 8 | 1 | WD40 | 12 | 25 | 1.69557e-43 | 144.9 | 3.7e-05 | 0.06 | 13.2 |
| pfu_aug2.0_325.1_17282.t1 | 8 | 2 | WD40 | 32 | 67 | 1.69557e-43 | 144.9 | 0.00023 | 0.38 | 10.7 |
| pfu_aug2.0_325.1_17282.t1 | 8 | 3 | WD40 | 75 | 111 | 1.69557e-43 | 144.9 | 3.0e-09 | 4.9e-06 | 26.2 |
| pfu_aug2.0_325.1_17282.t1 | 8 | 4 | WD40 | 119 | 154 | 1.69557e-43 | 144.9 | 8.6e-07 | 0.0014 | 18.4 |
| pfu_aug2.0_325.1_17282.t1 | 8 | 5 | WD40 | 170 | 195 | 1.69557e-43 | 144.9 | 0.068 | 110.0 | 2.8 |
| pfu_aug2.0_325.1_17282.t1 | 8 | 6 | WD40 | 210 | 245 | 1.69557e-43 | 144.9 | 5.7e-11 | 9.4e-08 | 31.6 |
| pfu_aug2.0_325.1_17282.t1 | 8 | 7 | WD40 | 261 | 288 | 1.69557e-43 | 144.9 | 7.0e-10 | 1.1e-06 | 28.2 |
| pfu_aug2.0_325.1_17282.t1 | 8 | 8 | WD40 | 292 | 310 | 1.69557e-43 | 144.9 | 0.00088 | 1.5 | 8.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_325.1_17282.t1 | gi|524879967|ref|XP_005096652.1| | PREDICTED: target of rapamycin complex subunit lst8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_325.1_17282.t1 | gi|291233680|ref|XP_002736782.1| | PREDICTED: target of rapamycin complex subunit lst8-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_325.1_17282.t1 | gi|156350363|ref|XP_001622250.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_325.1_17282.t1 | gi|395515762|ref|XP_003762068.1| | PREDICTED: target of rapamycin complex subunit LST8 [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_325.1_17282.t1 | gi|148226889|ref|NP_001083382.1| | target of rapamycin complex subunit lst8 [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_325.1_17282.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17282.t1 atgagtggtcataatggtaatagcgatcctgtcatactagctacggctggatatgatcataccatcaggttctggcaagc tcacagtggaatctgttacagaaccgtgcagcaccctgattctcaagtaaatgccttggagattactccagataaacagc ttctggctgcttcgggatatcagcacattcgtatgtatgacctgaattccaacaatccaaaccccgttataaactatgac ggcatctccaaaaatgtcactggtgtaggatttcaagaagatggtaaatggatgtacacaggaggggaagataactctgt cagaatttgggacctacggtcaagaaatctacagtgtcagaagatatttcaagttgatgcacctgttaattgtgtttgcc ttcacccaaatcagggtgaactgttcattggagaccaaagtggttcaatccatgtatgggatctgaaaacgaacaacaat gaacatttgattcctgagaaggatgcctcaatacagagtataagtatagatcccatgggaacaatgatggcagctacaaa taacaagggtaggtgttatatatggactttgactgggggaaggacagacactacaaaactccatgccaaaaataagtttg aagcccatagtcgttgcattttgaaatgtttattcagccctgattctacattgcttgccaccacttctgcagaccagaca gcaaaaatctggaaaacagctgatctgtcgttactgaccaatctccgtgagaacacacagagatgggtgtgggactgtgc atttagtggggattctcagtacatcattacagcatcatcagacaatattgcacgactgtggtcagttgatagtggagagg tcaagaaagaatacagtggacatcagaaagctgttgtgtgtttagcattcagggacgaatttgtgcaataa |
|
Protein
| Protein ID | pfu_aug2.0_325.1_17282.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17282.t1 MSGHNGNSDPVILATAGYDHTIRFWQAHSGICYRTVQHPDSQVNALEITPDKQLLAASGYQHIRMYDLNSNNPNPVINYD GISKNVTGVGFQEDGKWMYTGGEDNSVRIWDLRSRNLQCQKIFQVDAPVNCVCLHPNQGELFIGDQSGSIHVWDLKTNNN EHLIPEKDASIQSISIDPMGTMMAATNNKGRCYIWTLTGGRTDTTKLHAKNKFEAHSRCILKCLFSPDSTLLATTSADQT AKIWKTADLSLLTNLRENTQRWVWDCAFSGDSQYIITASSDNIARLWSVDSGEVKKEYSGHQKAVVCLAFRDEFVQ |
|