Gene
| Gene Model ID | pfu_aug2.0_325.1_17283 |
|---|---|
| Locus | scaffold325.1 : 21296 ... 27902 : + |
| To GenomeBrowser | scaffold325.1:21296..27902 |
| Genes list of scaffold | scaffold325.1 |
| Synonym | pfu_aug1.0_27770.1_47857 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_325.1_17283.t1 | 2 | 1 | Fe_hyd_lg_C | 96 | 329 | 0.0 | 310.1 | 0.0 | 0.0 | 216.3 |
| pfu_aug2.0_325.1_17283.t1 | 2 | 2 | Fe_hyd_lg_C | 342 | 437 | 0.0 | 310.1 | 1.2e-29 | 4.6e-26 | 91.7 |
| pfu_aug2.0_325.1_17283.t1 | 1 | 1 | Fe_hyd_SSU | 446 | 497 | 1.6e-07 | 31.2 | 1.1e-10 | 4.0e-07 | 29.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_325.1_17283.t1 | gi|524910564|ref|XP_005110158.1| | PREDICTED: cytosolic Fe-S cluster assembly factor narfl-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_325.1_17283.t1 | gi|676436968|ref|XP_009048053.1| | hypothetical protein LOTGIDRAFT_111940 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_325.1_17283.t1 | gi|260801253|ref|XP_002595510.1| | hypothetical protein BRAFLDRAFT_118961 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_325.1_17283.t1 | gi|390345777|ref|XP_788197.3| | PREDICTED: cytosolic Fe-S cluster assembly factor narfl isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_325.1_17283.t1 | gi|291226566|ref|XP_002733248.1| | PREDICTED: cytosolic Fe-S cluster assembly factor narfl-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_325.1_17283.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17283.t1 atgttacacaaggaatgtataaaaccagtaaccattgagagaaagccaggaaaagttggtaaaatcaggatagaagatga tggaagttacatggaaattaccaacgaaggagtagagaggaagttacagaaggctaaaataacactgaatgattgtcttg cctgtagtggatgtattacgtcagcagagagtgtacttatcacacaacaaagtcaggatgaactctataaagttctacag gaaaatgcccagcttcttcaggcaggtaacagtgaggcacagagaactgttgtggtatccatatctccacagtccagggc atctatagcggccaagtacaagttgtccatcactgatacagctctcaggcttaatggattctttcagagacttggtgtac atcatgtactggacacaacatttgcacggaatttcagtttgttggaaagttgccaggaattcatccagagattcaaagaa tcagaaacaaacaaaacagccttcccaatgttggcttcagcttgtcctggctggatatgttatgcagagaagacacatgg aacctacattctgccatacattagtaccaccaagtctccccagcagatcatgggctcacttgttaaagattacttagcca atcaacttggcatcccgccagataagatatatcatgtgactgtgatgccatgttacgataaaaagcttgaggcctcacga tctgatttctacaacgatatttacagaacaagagatgtggactgtgtcataacttcaggcgaagtagaaaagatgttaga gcaagagggcgtatcattgtctcaggtggagccactcccattaacatctaatttcccatgtcttgtgaatggtgacgtac tcagtcatatgggagggggatctgggggctacctagaacatgtcatgaggtttgctgctagtcagatattgggacaccct gtagaccagctacagtacaaaactctcagtttcccatgtcttgtaaatggtgacgtactcagtcatatgggagggggatc tgggggctacctagaacatgtcatgaggtttgctgctagtcagatattgggacaccctgtagaccagctacagtacaaaa ctctcaggaatcaggatttccaagaggtgacggtagaggtaagcggaaaaccacctctcaagatggcgttagcgtatgga ttccgcaatattcaaaatatcgtgcagaaagtcaaacgtggaaaatgcccttatcactttgtagaaataatggcgtgtcc gtcaggatgtaataatggtggaggtcaaatacggcctgatgacggggagaacaataaagacagacttcaaacggtgacag atttatataactcaatgccaagtgtaacaccagacaattatagtggtgtaatggatgtttacaatgagtggttaggtggg ttcggctcagagaaggcaagaactatacttcacacccagtatcatgaagtagagaaaatgacaaacgctctggcaattaa atggtga |
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Protein
| Protein ID | pfu_aug2.0_325.1_17283.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17283.t1 MLHKECIKPVTIERKPGKVGKIRIEDDGSYMEITNEGVERKLQKAKITLNDCLACSGCITSAESVLITQQSQDELYKVLQ ENAQLLQAGNSEAQRTVVVSISPQSRASIAAKYKLSITDTALRLNGFFQRLGVHHVLDTTFARNFSLLESCQEFIQRFKE SETNKTAFPMLASACPGWICYAEKTHGTYILPYISTTKSPQQIMGSLVKDYLANQLGIPPDKIYHVTVMPCYDKKLEASR SDFYNDIYRTRDVDCVITSGEVEKMLEQEGVSLSQVEPLPLTSNFPCLVNGDVLSHMGGGSGGYLEHVMRFAASQILGHP VDQLQYKTLSFPCLVNGDVLSHMGGGSGGYLEHVMRFAASQILGHPVDQLQYKTLRNQDFQEVTVEVSGKPPLKMALAYG FRNIQNIVQKVKRGKCPYHFVEIMACPSGCNNGGGQIRPDDGENNKDRLQTVTDLYNSMPSVTPDNYSGVMDVYNEWLGG FGSEKARTILHTQYHEVEKMTNALAIKW |
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