Gene
| Gene Model ID | pfu_aug2.0_325.1_17285 |
|---|---|
| Locus | scaffold325.1 : 43846 ... 77500 : + |
| To GenomeBrowser | scaffold325.1:43846..77500 |
| Genes list of scaffold | scaffold325.1 |
| Synonym | pfu_aug1.0_11743.1_53731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_325.1_17285.t1 | 3 | 1 | DUF4631 | 198 | 354 | 2.6e-15 | 55.7 | 5.5e-09 | 4.1e-05 | 22.0 |
| pfu_aug2.0_325.1_17285.t1 | 3 | 2 | DUF4631 | 367 | 481 | 2.6e-15 | 55.7 | 0.23 | 1700.0 | -3.1 |
| pfu_aug2.0_325.1_17285.t1 | 3 | 3 | DUF4631 | 549 | 717 | 2.6e-15 | 55.7 | 5.0e-17 | 3.7e-13 | 48.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_325.1_17285.t1 | gi|585651055|ref|XP_006814680.1| | PREDICTED: coiled-coil domain-containing protein 154-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_325.1_17285.t1 | gi|198423305|ref|XP_002123709.1| | PREDICTED: coiled-coil domain-containing protein 154 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_325.1_17285.t1 | gi|390341530|ref|XP_003725472.1| | 0.0 | |
| pfu_aug2.0_325.1_17285.t1 | gi|524909321|ref|XP_005109708.1| | PREDICTED: trichohyalin-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_325.1_17285.t1 | gi|390341532|ref|XP_786030.3| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_325.1_17285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17285.t1 atgcagaacagtttattgtggagaaaactttaccacagtcctgggaactccaggcccaggagaaaccccatcacaatgga ggagtatcaacctccagtcagacggcctcccgccagcacccaattcccgaacaagtatggctatttgccggacattaatt caccgcgacccggagaaggggcacttgtaccgttgaccagaaaggcaagtccgggttaccgcccaccaagcgagctggat tccgacgacagagtacgtcagctggaggtccggctaggcgtggccgagaagtcgaacagagccttattggaggaggttct gaggttacaagctgaggtcaagaccaccaacaggaggaatgaggacctgattcgagaagagagaggctcacggcacaatt tggaatctgcaatgaaaattaacaatgaactgataactcagctaagttctagaatcaaagaagcggaggataagttgtca gaggagaaaactgccctgtcatcacttgtcaatcacacaaaaggggtggagcaagctgtcaggagcagtcaaaatgaact cattgcaaagaaagatgtgcaatcaggaaggataatagagatgaggaatgagttagattcactattaagttccaaagaac aactggagaggataacgttacaattatccgacgagctacggaatgtgaaattaaaacaggatcaacaaagttcagatttc tctagtgtcatgaatgaccttaaaacaaggtcaaaacgactcgaggaggaaagcagaacacagttggatgccttacgtaa aacaagctctgtacagagtcagtctgaacatcaaaccacacagctacggggtcaggtggaaacaagactggcagagttgc gggatgttttagttgacctgagagcaaaacaggaagcagaaataactgacagacggggactggagcagagcacgacaaca aaaatacatgaactacaacaacaactagcggaatccaacagaaaaagagaagaaaatatgcataaaatagacttgttact ccgtgaaaaggaacattctgctcaagctgataggattaacctcaactccaagcttgtacaacaagaacagcaacagagac gagaatatgagagggcagcacgagaggacagtgacagaaagttagcggttgttaaacacgggggagaggaaagtaatgca gaaatcagagaactcatgaagatagacagagctaagctaaatgccacactaaagaagcttgatgagtcaatatccattgt agagaaacaaacgttggaaaataaaaagtcttttgaaaaagtcatgtctgcagaaattagtcaaagactgaagccaagaa gggtgtcagtgatttatggtgtcatacaacgacaggaaatccgtcagttaatgcaggaccataaggattctacaacgcgt gctatgacggaccttgatgccaggatgaacttcttaaaagcgagaatgaacgagttcgaggaaaagttggaggcacgagt tgcaactcctactaaaacacctttacccacaccaccgcctccaccaccgccaaaacctccgacaccaccatctcaaccag aaataccgcaactaaacgcagaggccacccatctgttgtcagaaaatctccgtgagaaggtggaggctatatctatgtgg caggataccacacagcaaaccattaaagaaatgagtatcagcctggccaagctaccagaggaggccacccatctgttgtc agaaaatctccgtgagaaggtggaggctatatctatgtggcaggataccacacagcaaaccattaaagaaatgagtatca gcctggccaagctaccagaggaggtatatgctgtccaagagaagcagactttgatgaaaaacgaaatggactccagagta acggtagaaacagagaaaagggcacaagaaattgcaacattaaaacaagaaatagaagcattaaaacagaggcgggatcc aaaccctgccacacagcaagatatcagcaatgtacaagcaagtctgaggaagatggccgactccatacagacggtaaaaa ccgtgcttggtatgaagatccagtcagagcagaaactgagagtgtcaggtttagaagacttgcaaactcaaataaatcaa atcaaagtcaatgctgggatgggtaacgtatataataccaggccagactaccttagacatgaccttgacactggactggg gtcatgggacgaccccacacctcagaccctcactggcaaggatgcttcctcaagaggtggagaagtcagtaccgcaagga atgaatcaggagggcaaaacgtatcgcaaatgggggcaataccggagggtggggaatcagggcgcacaaaaacacctaac acgccaaccaatggtaaatctaaagactctcctcgtagaaatgacacaactgcacagagtagaaacaatactcccactgc acaaggtaccacaaattcaccttcaaaaagtagaaatgcgacccctgttaataaaaccccaaggaacgccactcctgcag gcacccccgcaggcacacccaaagataggacccctgctcagtcacgtaatgccacccccaacactggcagaaataaagac cagaataatgcagctaccaccaaccagggaggagagacttctactagcctggaaaatgtctag |
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Protein
| Protein ID | pfu_aug2.0_325.1_17285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17285.t1 MQNSLLWRKLYHSPGNSRPRRNPITMEEYQPPVRRPPASTQFPNKYGYLPDINSPRPGEGALVPLTRKASPGYRPPSELD SDDRVRQLEVRLGVAEKSNRALLEEVLRLQAEVKTTNRRNEDLIREERGSRHNLESAMKINNELITQLSSRIKEAEDKLS EEKTALSSLVNHTKGVEQAVRSSQNELIAKKDVQSGRIIEMRNELDSLLSSKEQLERITLQLSDELRNVKLKQDQQSSDF SSVMNDLKTRSKRLEEESRTQLDALRKTSSVQSQSEHQTTQLRGQVETRLAELRDVLVDLRAKQEAEITDRRGLEQSTTT KIHELQQQLAESNRKREENMHKIDLLLREKEHSAQADRINLNSKLVQQEQQQRREYERAAREDSDRKLAVVKHGGEESNA EIRELMKIDRAKLNATLKKLDESISIVEKQTLENKKSFEKVMSAEISQRLKPRRVSVIYGVIQRQEIRQLMQDHKDSTTR AMTDLDARMNFLKARMNEFEEKLEARVATPTKTPLPTPPPPPPPKPPTPPSQPEIPQLNAEATHLLSENLREKVEAISMW QDTTQQTIKEMSISLAKLPEEATHLLSENLREKVEAISMWQDTTQQTIKEMSISLAKLPEEVYAVQEKQTLMKNEMDSRV TVETEKRAQEIATLKQEIEALKQRRDPNPATQQDISNVQASLRKMADSIQTVKTVLGMKIQSEQKLRVSGLEDLQTQINQ IKVNAGMGNVYNTRPDYLRHDLDTGLGSWDDPTPQTLTGKDASSRGGEVSTARNESGGQNVSQMGAIPEGGESGRTKTPN TPTNGKSKDSPRRNDTTAQSRNNTPTAQGTTNSPSKSRNATPVNKTPRNATPAGTPAGTPKDRTPAQSRNATPNTGRNKD QNNAATTNQGGETSTSLENV |
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