Gene
| Gene Model ID | pfu_aug2.0_325.1_17288 |
|---|---|
| Locus | scaffold325.1 : 90406 ... 105644 : + |
| To GenomeBrowser | scaffold325.1:90406..105644 |
| Genes list of scaffold | scaffold325.1 |
| Synonym | pfu_aug1.0_609.1_15153 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_325.1_17288.t1 | 2 | 1 | Lactamase_B | 200 | 217 | 1.5e-13 | 50.8 | 1.0 | 3800.0 | -2.7 |
| pfu_aug2.0_325.1_17288.t1 | 2 | 2 | Lactamase_B | 399 | 588 | 1.5e-13 | 50.8 | 1.8e-16 | 6.5e-13 | 48.7 |
| pfu_aug2.0_325.1_17288.t1 | 1 | 1 | Lactamase_B_2 | 415 | 622 | 8.1e-29 | 100.5 | 5.4e-32 | 2.0e-28 | 99.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_325.1_17288.t1 | gi|530636716|ref|XP_005305190.1| | PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_325.1_17288.t1 | gi|683936920|ref|XP_009097332.1| | PREDICTED: zinc phosphodiesterase ELAC protein 2 [Serinus canaria] | 0.0 |
| pfu_aug2.0_325.1_17288.t1 | gi|733914339|ref|XP_010719499.1| | PREDICTED: zinc phosphodiesterase ELAC protein 2 [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_325.1_17288.t1 | gi|727058317|ref|XP_010407855.1| | PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X1 [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_325.1_17288.t1 | gi|543280161|ref|XP_005427910.1| | PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Geospiza fortis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_325.1_17288.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17288.t1 atgattactgcagtaggcaccaagaattgcatcattatcagactgaagccctctctcaacaggatcagtgatatatttac cagtacgagaataaataaaaagaaaatatataggagtaagagggataaaagaggttatgtaattctagaggagttagaag aagtaaagacgagggagatgcttaccattcatggtcctaacagtattgattccaaactgactgaaaatgtacaggagtcc aagggctgccaaagatttgagagaagacggttatgtgaaggagcctatgaagattatgtatgtagaattgaacatgtgat tctgaggaagggagacacaaagtctgggacagaagagaaaccattggatacaagctgttcagaaaacggaaagttagatg acctggataatgaccatgatattgctgtagcatacattattaaactaaagccgagaccccctaaaatagacataaataag tgtcgacagttaggagtaccaaaaggtccattgattgggaagctgtcaaaaaatgaaacagtagtcttagaggatggaag agagatccagcccagtgatgttcttattgatagagaagagacagacaagaaaataatagttcttgactgtcctactgaag aatacatagataatatgatcagatcagaggagttccacagatgccagcctccacaggaagatgaacgagagttaacagaa ctcatcattcatatgtctccgttagaagttactcagaatgtcagatataaggatttcttaaatagatttggatcggagac acgtcacatattcctacatgagaatacctgtccatatatgtatgaatctctgtatcgctactcagccaaactaaacctca tcagttcacgactctttcctcagttattacctggagtagattctatggaagctgctcaggaccagtcagaacaatacatt cagggacatccagagatggcataccatattcgtggcaaacacggcctggatttgaccatgtgtgtaaaatgtgattataa gagattccaagaagaatgtttgcaagaaattccaaatttacatggaaaaattcaggaagtttacagtagactacaagctg acaaagtcataaatggttgcagtaacagatttccagagatagtatttatggggaccacctcagcttgtccagccacatac agaaatgtctcatgtattctggtccatacaagtgagagcagtgctatacttttagattgtggaggaggaagtacctctca gctatatcagttctatggtcaaaacttcaaccatgtcatcacgaaaatcaaagctgtcttcatctcacatatacacgcgg atcataactcgggtttaattggtttcatcaaaagaaggaggaaagcattcgctgatatttgtaaagattacgagccttta tggctggccattccctacaattactggcaatggtggctaagaatatacaatgatatagatccaatcatggaccactgcag aaaaattccattaaaggatttgaatggacaagatcctaaagtcgttcaacagtttttacaaaaagttgatgttgcaaagt ttgagccggtgctagtacaccactgtcgggatgcctatggtttggttgttaccatgaaggacggttgtaaagtggtgtac tctggtgacactatgccatgtgaagcactcatacaaacaggggaggagtgtgacattctgatacatgagtgtacatttga ggactatttggaaagttatgctacaataaagaaacatagtacccaatcacaagctatagaagttggtcggaggatgaggg ctaagtatgtaatactgacccacttcagtgctcgatatcaacctttctaccatctaaataatgcaccagataatgtgttt gcagcatttgattttatgaggataactttagatgatttacctttgctaaagtatgtaaaagagatcttgcctgtagcttt tgctgaagaaataacagaactggagaaaaaagagcaaaagtttagaaagagagaagcagagggcagaataaattctaagt acaaacaattgtgtgcaaagaatggtaacacatcagaaaagaggaaagactgtgatactcagaacaattcaaagaattta aatacccaaacagactcaaagaaactcaaaacagagcaaaatggaaactcatga |
|
Protein
| Protein ID | pfu_aug2.0_325.1_17288.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17288.t1 MITAVGTKNCIIIRLKPSLNRISDIFTSTRINKKKIYRSKRDKRGYVILEELEEVKTREMLTIHGPNSIDSKLTENVQES KGCQRFERRRLCEGAYEDYVCRIEHVILRKGDTKSGTEEKPLDTSCSENGKLDDLDNDHDIAVAYIIKLKPRPPKIDINK CRQLGVPKGPLIGKLSKNETVVLEDGREIQPSDVLIDREETDKKIIVLDCPTEEYIDNMIRSEEFHRCQPPQEDERELTE LIIHMSPLEVTQNVRYKDFLNRFGSETRHIFLHENTCPYMYESLYRYSAKLNLISSRLFPQLLPGVDSMEAAQDQSEQYI QGHPEMAYHIRGKHGLDLTMCVKCDYKRFQEECLQEIPNLHGKIQEVYSRLQADKVINGCSNRFPEIVFMGTTSACPATY RNVSCILVHTSESSAILLDCGGGSTSQLYQFYGQNFNHVITKIKAVFISHIHADHNSGLIGFIKRRRKAFADICKDYEPL WLAIPYNYWQWWLRIYNDIDPIMDHCRKIPLKDLNGQDPKVVQQFLQKVDVAKFEPVLVHHCRDAYGLVVTMKDGCKVVY SGDTMPCEALIQTGEECDILIHECTFEDYLESYATIKKHSTQSQAIEVGRRMRAKYVILTHFSARYQPFYHLNNAPDNVF AAFDFMRITLDDLPLLKYVKEILPVAFAEEITELEKKEQKFRKREAEGRINSKYKQLCAKNGNTSEKRKDCDTQNNSKNL NTQTDSKKLKTEQNGNS |
|