Gene
| Gene Model ID | pfu_aug2.0_325.1_17290 |
|---|---|
| Locus | scaffold325.1 : 127056 ... 142041 : + |
| To GenomeBrowser | scaffold325.1:127056..142041 |
| Genes list of scaffold | scaffold325.1 |
| Synonym | pfu_aug1.0_609.1_15151 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ccr4-not transcription complex subunit 3-like isoform x2 | GO:0005634 GO:0006355 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_325.1_17290.t1 | 2 | 1 | Not3 | 8 | 32 | 0.0 | 244.4 | 0.26 | 380.0 | 0.1 |
| pfu_aug2.0_325.1_17290.t1 | 2 | 2 | Not3 | 44 | 232 | 0.0 | 244.4 | 0.0 | 0.0 | 244.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_325.1_17290.t1 | gi|328783040|ref|XP_395261.3| | PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X2 [Apis mellifera] | 0.0 |
| pfu_aug2.0_325.1_17290.t1 | gi|571502219|ref|XP_006563346.1| | PREDICTED: CCR4-NOT transcription complex subunit 3-like isoform X1 [Apis mellifera] | 0.0 |
| pfu_aug2.0_325.1_17290.t1 | gi|340719054|ref|XP_003397972.1| | PREDICTED: CCR4-NOT transcription complex subunit 3 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_325.1_17290.t1 | gi|749753424|ref|XP_011139104.1| | PREDICTED: CCR4-NOT transcription complex subunit 3 isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_325.1_17290.t1 | gi|749753422|ref|XP_011139103.1| | PREDICTED: CCR4-NOT transcription complex subunit 3 isoform X1 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_325.1_17290.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17290.t1 atgggcattaaggaattggaggcaataaaggcgagagtgagggaaatggaagaagaggcagagaaattaaaagaaatgca gaaagaagtggatacacagatgaacatgacatcacctgttcaagctgctggtgaaattgacagatgcttaaagaaagtca cagaaggagtggaatcttttgaagatatttggcaaaaggttcataatgcagcaaacaccaatcaaaaggagaagtatgag gcagatctcaaacgtgagatcaaaaagctgcagcgcctcagagaccaaatcaagacatgggttgccagcagtgatatcaa agacaagcgatgtttggtggagaataggaagctgatagaaactcaaatggagagattcaaagttgtggagcgagaaacaa aaacaaaggcatattctaaggaaggattaggagcagcagcaaaactagatcctgccgccaaagaaaaaacagaagtcacg aactggctatcaggtgcaatcgagagtttacagatacagcttgaccaatttgagagtgatattgaaaagctttcttcaaa gaagaagaaaatggataaagataagcaagatcgtttcgatgagttaaaaggtttccaagacaaacataaaagccacataa agaatctagagaccataatgaggatggtggataatgatgccctccccttagatcaggacaaatctgatgatgataggaaa aggcacaagtcacaaaatgatgagagtaaatcaacgacagggttctcatcgccttcatcaacaaactcatcatcttcatc caatgtgccaccaaacatcaaagttcctttaacgcctacaaaacctttcacagggtatgacaaaatatggaatacaacaa attctgagtcgggtacaaacagcaatcatcatacactgtcaacgcctccccctctcactggcttctctatggtggccgga tctcagcagaacagtacgacagcttggaggttcattttcttcctcattgtatcactctgccattga |
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Protein
| Protein ID | pfu_aug2.0_325.1_17290.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17290.t1 MGIKELEAIKARVREMEEEAEKLKEMQKEVDTQMNMTSPVQAAGEIDRCLKKVTEGVESFEDIWQKVHNAANTNQKEKYE ADLKREIKKLQRLRDQIKTWVASSDIKDKRCLVENRKLIETQMERFKVVERETKTKAYSKEGLGAAAKLDPAAKEKTEVT NWLSGAIESLQIQLDQFESDIEKLSSKKKKMDKDKQDRFDELKGFQDKHKSHIKNLETIMRMVDNDALPLDQDKSDDDRK RHKSQNDESKSTTGFSSPSSTNSSSSSNVPPNIKVPLTPTKPFTGYDKIWNTTNSESGTNSNHHTLSTPPPLTGFSMVAG SQQNSTTAWRFIFFLIVSLCH |
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