Gene
| Gene Model ID | pfu_aug2.0_325.1_17295 |
|---|---|
| Locus | scaffold325.1 : 205690 ... 217437 : + |
| To GenomeBrowser | scaffold325.1:205690..217437 |
| Genes list of scaffold | scaffold325.1 |
| Synonym | pfu_aug1.0_8091.1_02543 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_325.1_17295.t1 | 2 | 1 | DUF2404 | 712 | 768 | 5.3e-12 | 45.6 | 2.3e-15 | 3.5e-11 | 43.0 |
| pfu_aug2.0_325.1_17295.t1 | 2 | 2 | DUF2404 | 903 | 931 | 5.3e-12 | 45.6 | 0.18 | 2600.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_325.1_17295.t1 | gi|620962317|ref|XP_007666272.1| | PREDICTED: testis-expressed sequence 2 protein isoform X2 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_325.1_17295.t1 | gi|149635056|ref|XP_001510414.1| | PREDICTED: testis-expressed sequence 2 protein isoform X1 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_325.1_17295.t1 | gi|632943418|ref|XP_007886938.1| | PREDICTED: testis-expressed sequence 2 protein isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_325.1_17295.t1 | gi|556970437|ref|XP_005993802.1| | PREDICTED: testis-expressed sequence 2 protein isoform X7 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_325.1_17295.t1 | gi|632943414|ref|XP_007886936.1| | PREDICTED: testis-expressed sequence 2 protein isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_325.1_17295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17295.t1 atgtcatccaaaaagtctagtttaggaggttctatgaagttcagcttcaaatctttggaggaagatgaggaggatgaaga ggagctaacatcagtgtcaaaagacctcgaaatcaagaaggagcctcctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagacctgtaggtcctcctggtagtgctcataaacaaagtgt agattataggcctcctaaactacaggcaacatccaagtcccttgaggaagataagatttcaggtctgaagagtaagttga agacaaacttcacagacatcaaagcaaaagttgtcaaaaaattggaggactttcatcacgacatttcttcctcaccagat agtgatactgagaggaatgtggaggaagaagatgatgaaaaggcagacggtaatagtgaagtaacacttgttgtacaggc agacactgagaccaaaaagtctgaaaattccgaaaatgatgggaaaattgatactgaaatagaaacggaagaaaaagtgt cagaaactgtagctgatcaggaggagtttcaaatcgtagatgatttctacgatactgacaccacatcattacaatcctct atatcagctatacctacagcacctgaaattcgatatcgtaataagtcattgcctcaaaaactgaaaccaaagagtaaagg gacaagtgtagtttccgctgctcccgtgtctttgtcaaatatccgagagcatgcccaggtagatgactcccctgtgaagg actccgcccctgagggaggaggagaggaggcagttggggacgtgttccatgatgtaaaacctggtgataataacaacgca cacggaggaggtacacctcaaacctcctctgttcctacgcacaacacatctcaaaaacaacatgtgccttggaaaaatat tatcacagctagcgttgtagtgacattttactggatcattccattaccctcctacatatctggcctaataatgggcgtgt tcctcaccactctgtgtagtatagcgtacatcaagctgaccacaccccctccccccagacctgaccctcagccactcccc ctggatcagctcccaccattcatcatgcccgagatgaaggatgtcaaaactgaggattacgtcttcaggggttggatgaa tgaaatagtttcctatgatccatttagatatagtataaatgacacacatgttgtccacgtgctgctagaaagaacaaaac taagactgagaagaacaaaagccaacatcccaaaacgggctgtatgggatgaatatattccgaatgtcacagaattcgta cacggaagacattttgatattaagggtagtcgtgtgtttctgaaaccagagggattagtccagaagagattatggagcaa aaagtatcctatatgtatagaactagtgaagaaagataaaccactggagaagaaagaaaggactatgtcggatagtgttt tagataaaactacagactctgggactattttacctagagatgaaacctttcatggatttgaattggtgacaaatgaaaaa tgtgatgacaatatattgtacttgtttgccagaacatctcgtgaaaaagaggactggtttcggagattacaggcagctgc tgccggaaaaccgttgaaaagtaacttaggaagaattcggaaattcttcgagaccaaaattccccaaaatcaaaaggaga gtcaggatggagaagtcaaacagcaccaacgtagggaaagtaacgagagtcttggtgaaaaccaggagagtggcatgcct acgcacacacgccaagattcggcagattccgtgcaatcattaggacttggtcctatacagcaatctgaagggacatcatc gggagaaaatctggatatggaacagtttgttagatatatgagtaaactaatgccacgcgatatgtacgacagattctcac ccccatataaacgtaatgtccgtgattccaatatgatagactgtgaggaccagacaccatacttcattgagaagctcaag cttacagacatcaatctgggatctgttatgccagttttgaggaaggcctcccgtccatactttgatgaagatggattatg ggtaaatctagcgttaaactacggtggagggttcaaaatgaccatagaaactaaagtcaacttgatgaagttacgggatg tcgaagtcaagagggcagaaagagagacaaaggaaaaagagaaagcaaggaaaaaactggccatattagatgagaatgaa gaggacagtgcagagtcatctacagatgaagaggaggaaaattctctaacaggatcaaatgaggaaggggggaagaagaa gttcatgaacattttgaacaagatcacacagtccaagtacttcaaaagtgctacagagatgaaatatgtgaagaaggcca tggagggtgtgtctngatttctgtcttgtgaactagcactcaacattcccttccctcctactgacagactctggtatgga tttaatggtaatcccaagctgtcgttggtagccaaacctaaagttggtgcaagggaggtaacagtcacttatattacaga gtggatagagaagaaactggctacagaattccagcgagttgttgtgatgccaaacatggatgatctgacaatacccatac tgataccagaaaacacatcaatgccacccaaaataacgacatcacagaccgatcctgagctgaccagtctctcgtaa |
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Protein
| Protein ID | pfu_aug2.0_325.1_17295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17295.t1 MSSKKSSLGGSMKFSFKSLEEDEEDEEELTSVSKDLEIKKEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXRPVGPPGSAHKQSVDYRPPKLQATSKSLEEDKISGLKSKLKTNFTDIKAKVVKKLEDFHHDISSSPD SDTERNVEEEDDEKADGNSEVTLVVQADTETKKSENSENDGKIDTEIETEEKVSETVADQEEFQIVDDFYDTDTTSLQSS ISAIPTAPEIRYRNKSLPQKLKPKSKGTSVVSAAPVSLSNIREHAQVDDSPVKDSAPEGGGEEAVGDVFHDVKPGDNNNA HGGGTPQTSSVPTHNTSQKQHVPWKNIITASVVVTFYWIIPLPSYISGLIMGVFLTTLCSIAYIKLTTPPPPRPDPQPLP LDQLPPFIMPEMKDVKTEDYVFRGWMNEIVSYDPFRYSINDTHVVHVLLERTKLRLRRTKANIPKRAVWDEYIPNVTEFV HGRHFDIKGSRVFLKPEGLVQKRLWSKKYPICIELVKKDKPLEKKERTMSDSVLDKTTDSGTILPRDETFHGFELVTNEK CDDNILYLFARTSREKEDWFRRLQAAAAGKPLKSNLGRIRKFFETKIPQNQKESQDGEVKQHQRRESNESLGENQESGMP THTRQDSADSVQSLGLGPIQQSEGTSSGENLDMEQFVRYMSKLMPRDMYDRFSPPYKRNVRDSNMIDCEDQTPYFIEKLK LTDINLGSVMPVLRKASRPYFDEDGLWVNLALNYGGGFKMTIETKVNLMKLRDVEVKRAERETKEKEKARKKLAILDENE EDSAESSTDEEEENSLTGSNEEGGKKKFMNILNKITQSKYFKSATEMKYVKKAMEGVSXFLSCELALNIPFPPTDRLWYG FNGNPKLSLVAKPKVGAREVTVTYITEWIEKKLATEFQRVVVMPNMDDLTIPILIPENTSMPPKITTSQTDPELTSLS |
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