Gene
| Gene Model ID | pfu_aug2.0_325.1_17296 |
|---|---|
| Locus | scaffold325.1 : 218371 ... 227569 : - |
| To GenomeBrowser | scaffold325.1:218371..227569 |
| Genes list of scaffold | scaffold325.1 |
| Synonym | pfu_aug1.0_13156.1_32300 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_325.1_17296.t1 | 2 | 1 | DUF3456 | 50 | 199 | 1.2e-30 | 106.4 | 1.7e-34 | 1.2e-30 | 106.4 |
| pfu_aug2.0_325.1_17296.t1 | 2 | 2 | DUF3456 | 219 | 221 | 1.2e-30 | 106.4 | 1.3 | 9500.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_325.1_17296.t1 | gi|676485093|ref|XP_009063552.1| | hypothetical protein LOTGIDRAFT_204607 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_325.1_17296.t1 | gi|198426683|ref|XP_002129613.1| | PREDICTED: protein canopy 4-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_325.1_17296.t1 | gi|524874196|ref|XP_005093837.1| | PREDICTED: protein canopy homolog 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_325.1_17296.t1 | gi|557016092|ref|XP_006008490.1| | PREDICTED: protein canopy 4-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_325.1_17296.t1 | gi|157106020|ref|XP_001649130.1| | AAEL004425-PA [Aedes aegypti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_325.1_17296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17296.t1 atgatagtcagagtagggcttcatttattgctttgtatcacttgtataggtataattgtttctgctcaagatgacagagg agtagaactgccaagtttgtgtgaaggaagtaattaccctcagatcttgcctgacatttacactgaaagtcanctgaagg aacggttagaagagacagggaagtcaaaagaagtactgtccacaggacatgggttagagaggaagaaaactcaggcttat aaaacatcagaattgaggttaatagaagccacaacagatccccatatctgtgataaaatcctgaagtataatgtacacaa ggaacgtaaaggcagcaataggtttgcaaagggtaggagtgaaactatggatacattgcatggtttagtgaacaaaggtg taaaggtagagctaggtattccttatgaactttgggatgaaccatctgtggagataacagacatgcaaagaaagtgtaat aacatggcagagagatatgaggacgatatagaggactggtactataattaccaagataaagatctcatgaagtatttatg tgtagacagagtacttagaaaagatgatacagcttgtttgtatgaaaaaccccatataaaaggtgaaaataatgatgatg aagaaaatgatgaagatgataaagataacaagaaatctgagaggaaaaagtaatctatacagtag |
|
Protein
| Protein ID | pfu_aug2.0_325.1_17296.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_325.1_17296.t1 MIVRVGLHLLLCITCIGIIVSAQDDRGVELPSLCEGSNYPQILPDIYTESXLKERLEETGKSKEVLSTGHGLERKKTQAY KTSELRLIEATTDPHICDKILKYNVHKERKGSNRFAKGRSETMDTLHGLVNKGVKVELGIPYELWDEPSVEITDMQRKCN NMAERYEDDIEDWYYNYQDKDLMKYLCVDRVLRKDDTACLYEKPHIKGENNDDEENDEDDKDNKKSERKKXSIQ |
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