Gene
| Gene Model ID | pfu_aug2.0_3250.1_02371 |
|---|---|
| Locus | scaffold3250.1 : 52476 ... 68240 : + |
| To GenomeBrowser | scaffold3250.1:52476..68240 |
| Genes list of scaffold | scaffold3250.1 |
| Synonym | pfu_aug1.0_3851.1_30547 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3250.1_02371.t1 | 3 | 1 | C1q | 33 | 54 | 3.6e-12 | 46.3 | 0.25 | 3700.0 | -2.2 |
| pfu_aug2.0_3250.1_02371.t1 | 3 | 2 | C1q | 110 | 123 | 3.6e-12 | 46.3 | 0.29 | 4300.0 | -2.4 |
| pfu_aug2.0_3250.1_02371.t1 | 3 | 3 | C1q | 373 | 425 | 3.6e-12 | 46.3 | 2.4e-16 | 3.6e-12 | 46.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3250.1_02371.t1 | gi|70942861|ref|XP_741546.1| | hypothetical protein [Plasmodium chabaudi chabaudi] | 1.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_3250.1_02371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3250.1_02371.t1 atgatacttggtggtgttaacatgttgccaatatgcttgcatcataagacaacaaacaacaagggtcaacaaacaacacg ggacaaaaaacaacacagtacaaaaaacaacaaggaacaacaaacaatacgggacaacagacaacaagggacaacaagca atacggaacaacaaacaacacgggacaacaaacaatacgggaaacaaacaacacgggacaacaaacaacaagggacaaca aacaatacgggaaaacaaacaacaagggacaacaaacaatacgggacaacaaacaacacgagacaacaaacaatacggga caacaaacaacacagaacaaaaacaatacgatacaacaaacaacaaggatcaacaaacaacaaggatcaacaaacaacac gggaaacaaacaacacgggacaacaaacaatacaggacaacaaacaacaatggacaacaaacaacaaggaacaacaaaca atacgggacaacaaacaacaatggacaacaaacaacaaggaacaacaaacaatacgggacaacaaacaacacgggacaac agacaacaagggacaacaaacaacaagggacaaaaaacaatacgggacaacaaacaacacaggacaaaaaacaattagga acaaaaaacaattcgggacaacagacaacaagggacaacaaacaacacgtatgcggtataagtatggcaaatctaaatct aaattgttagtgtcggagccaaaggaagcaagaactgatttgtggttgtctatcattttagaggcagaaaggtttgttag ggtatcatacgaaataaagctagccgagcaacagaaagtgattgacgaacaggcaattgagatatcttcattgaagagat ttgtttttcaaagatttgactccattcgggagagtaatgtcaggaatgatgatacaaagaaagaggcattggaaaatctt ttctctgcccgaaaaaccatcaacaaacttagcaggaatgaactgtcaactgtcaatgaagattccaagcttggtcgata ccatggcaaggaagaagttgtcgattatcataattttcaatcccccactcttaagaaaagacaagtatcgtccatagctt tcagtgtcttcctcagtcatgatgcagatctaggaggagatcaaatagtcaaatttgataagataattacaaacgaagga aatggctacaatgtacatagtggggcgttcacgtgtccagaaggaggcatatacttgttttcgtattttgtcggagaaag caat |
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Protein
| Protein ID | pfu_aug2.0_3250.1_02371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3250.1_02371.t1 MILGGVNMLPICLHHKTTNNKGQQTTRDKKQHSTKNNKEQQTIRDNRQQGTTSNTEQQTTRDNKQYGKQTTRDNKQQGTT NNTGKQTTRDNKQYGTTNNTRQQTIRDNKQHRTKTIRYNKQQGSTNNKDQQTTRETNNTGQQTIQDNKQQWTTNNKEQQT IRDNKQQWTTNNKEQQTIRDNKQHGTTDNKGQQTTRDKKQYGTTNNTGQKTIRNKKQFGTTDNKGQQTTRMRYKYGKSKS KLLVSEPKEARTDLWLSIILEAERFVRVSYEIKLAEQQKVIDEQAIEISSLKRFVFQRFDSIRESNVRNDDTKKEALENL FSARKTINKLSRNELSTVNEDSKLGRYHGKEEVVDYHNFQSPTLKKRQVSSIAFSVFLSHDADLGGDQIVKFDKIITNEG NGYNVHSGAFTCPEGGIYLFSYFVGESN |
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