Gene
Gene Model ID | pfu_aug2.0_3253.1_12411 |
---|---|
Locus | scaffold3253.1 : 11356 ... 15925 : + |
To GenomeBrowser | scaffold3253.1:11356..15925 |
Genes list of scaffold | scaffold3253.1 |
Synonym | pfu_aug1.0_1917.1_44187 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
neuronal acetylcholine receptor subunit alpha-9 | GO:0005216 GO:0006811 GO:0016020 GO:0044763 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_3253.1_12411.t1 | 1 | 1 | Neur_chan_LBD | 40 | 244 | 0.0 | 186.3 | 0.0 | 0.0 | 185.8 |
pfu_aug2.0_3253.1_12411.t1 | 1 | 1 | Neur_chan_memb | 254 | 466 | 3.6e-24 | 85.9 | 1.4e-27 | 1.0e-23 | 84.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_3253.1_12411.t1 | gi|156386836|ref|XP_001634117.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_3253.1_12411.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3253.1_12411.t1 atggctggacattttcacatctggaggaaaactacatatttgtatttatggattttggtgattttatcaattcaaggtat cactgttacattatctacacaaaatagagcacttggtttatataaacgattgtttcataacgagtaccaagcagccatca tcccgctatgctctgacgttgataaagtgaaagtacgagttgatatggctttgagagagttagtcgaactccacgaaaaa catcaattgattaggcttaaaatctggatgagattgaaatggaatgactgtaccttaagatggaattccacagaattcaa tggaatcgagtccataacaataccatatggaaatgtatggatcccggatataacgctatacgaaggatctagtgacgagg cgaatatgccagggaaagacgaatattacgcaagagttgactcggatggaaccgtaacctataatttcccgtcaatcatc acggcttcttgtcaaatagacgtcaccttcttcccatatgatcgtcagaactgcagcttgacgtttgggtcttggattca tgatggaaatctaatcgaccttgaacttgtgaatccatatgcagacactgaaaaatttgttcatcataacgaatggaact tggagtttgttccagcatttaaacatgtgctttattacaactgttgcccagagccgtatcccgacgtaacctattacgtc agtctgtcacgtttcccgaagttttatctgttgacagtttttgtaccgtgtgttataatttcgatcctttccattttggg ttttgttctgcccccggtatccggagacaaaatatcgttacagatcacggttttattatccatcgtagtgtttctcttgc tagtacaagacaagctgccgtcttcttccgacacgttccctcacctcggtgtatttttcatgacggcgatgtgcttgaca agtttgtcatgtgttatgtctggaattatcatgtatgtctattatagggatattactggtagaaaaattccggtttgcat ccgagtgttttttctcaaatatatgagaagaattttgtgcgtaaaactcaaacctggaagcggttctatgtacgagatgg aaaatgacgtcatagtgaaaaatattcagactctagacggaaaacaactacaaaatggcgattgtactaaacttcatcgt ggtcgccattcaataaaaagagaaagcgtagtaataacttcaaaacacgatatcccgtcctttcatgaaccggaagcgga aagtggaccaaaacacgcgggaaacagtatcaaacattacgttacaaacgaatgggaattactggcatacgttttagaca gattatttatgattgtgtatatacttttaacgtctattaacgttttctcgtacctcttcattatgagaaatgaacttcac aggttttaa |
Protein
Protein ID | pfu_aug2.0_3253.1_12411.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3253.1_12411.t1 MAGHFHIWRKTTYLYLWILVILSIQGITVTLSTQNRALGLYKRLFHNEYQAAIIPLCSDVDKVKVRVDMALRELVELHEK HQLIRLKIWMRLKWNDCTLRWNSTEFNGIESITIPYGNVWIPDITLYEGSSDEANMPGKDEYYARVDSDGTVTYNFPSII TASCQIDVTFFPYDRQNCSLTFGSWIHDGNLIDLELVNPYADTEKFVHHNEWNLEFVPAFKHVLYYNCCPEPYPDVTYYV SLSRFPKFYLLTVFVPCVIISILSILGFVLPPVSGDKISLQITVLLSIVVFLLLVQDKLPSSSDTFPHLGVFFMTAMCLT SLSCVMSGIIMYVYYRDITGRKIPVCIRVFFLKYMRRILCVKLKPGSGSMYEMENDVIVKNIQTLDGKQLQNGDCTKLHR GRHSIKRESVVITSKHDIPSFHEPEAESGPKHAGNSIKHYVTNEWELLAYVLDRLFMIVYILLTSINVFSYLFIMRNELH RF |