Gene
| Gene Model ID | pfu_aug2.0_3253.1_12411 |
|---|---|
| Locus | scaffold3253.1 : 11356 ... 15925 : + |
| To GenomeBrowser | scaffold3253.1:11356..15925 |
| Genes list of scaffold | scaffold3253.1 |
| Synonym | pfu_aug1.0_1917.1_44187 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-9 | GO:0005216 GO:0006811 GO:0016020 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3253.1_12411.t1 | 1 | 1 | Neur_chan_LBD | 40 | 244 | 0.0 | 186.3 | 0.0 | 0.0 | 185.8 |
| pfu_aug2.0_3253.1_12411.t1 | 1 | 1 | Neur_chan_memb | 254 | 466 | 3.6e-24 | 85.9 | 1.4e-27 | 1.0e-23 | 84.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3253.1_12411.t1 | gi|156386836|ref|XP_001634117.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3253.1_12411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3253.1_12411.t1 atggctggacattttcacatctggaggaaaactacatatttgtatttatggattttggtgattttatcaattcaaggtat cactgttacattatctacacaaaatagagcacttggtttatataaacgattgtttcataacgagtaccaagcagccatca tcccgctatgctctgacgttgataaagtgaaagtacgagttgatatggctttgagagagttagtcgaactccacgaaaaa catcaattgattaggcttaaaatctggatgagattgaaatggaatgactgtaccttaagatggaattccacagaattcaa tggaatcgagtccataacaataccatatggaaatgtatggatcccggatataacgctatacgaaggatctagtgacgagg cgaatatgccagggaaagacgaatattacgcaagagttgactcggatggaaccgtaacctataatttcccgtcaatcatc acggcttcttgtcaaatagacgtcaccttcttcccatatgatcgtcagaactgcagcttgacgtttgggtcttggattca tgatggaaatctaatcgaccttgaacttgtgaatccatatgcagacactgaaaaatttgttcatcataacgaatggaact tggagtttgttccagcatttaaacatgtgctttattacaactgttgcccagagccgtatcccgacgtaacctattacgtc agtctgtcacgtttcccgaagttttatctgttgacagtttttgtaccgtgtgttataatttcgatcctttccattttggg ttttgttctgcccccggtatccggagacaaaatatcgttacagatcacggttttattatccatcgtagtgtttctcttgc tagtacaagacaagctgccgtcttcttccgacacgttccctcacctcggtgtatttttcatgacggcgatgtgcttgaca agtttgtcatgtgttatgtctggaattatcatgtatgtctattatagggatattactggtagaaaaattccggtttgcat ccgagtgttttttctcaaatatatgagaagaattttgtgcgtaaaactcaaacctggaagcggttctatgtacgagatgg aaaatgacgtcatagtgaaaaatattcagactctagacggaaaacaactacaaaatggcgattgtactaaacttcatcgt ggtcgccattcaataaaaagagaaagcgtagtaataacttcaaaacacgatatcccgtcctttcatgaaccggaagcgga aagtggaccaaaacacgcgggaaacagtatcaaacattacgttacaaacgaatgggaattactggcatacgttttagaca gattatttatgattgtgtatatacttttaacgtctattaacgttttctcgtacctcttcattatgagaaatgaacttcac aggttttaa |
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Protein
| Protein ID | pfu_aug2.0_3253.1_12411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3253.1_12411.t1 MAGHFHIWRKTTYLYLWILVILSIQGITVTLSTQNRALGLYKRLFHNEYQAAIIPLCSDVDKVKVRVDMALRELVELHEK HQLIRLKIWMRLKWNDCTLRWNSTEFNGIESITIPYGNVWIPDITLYEGSSDEANMPGKDEYYARVDSDGTVTYNFPSII TASCQIDVTFFPYDRQNCSLTFGSWIHDGNLIDLELVNPYADTEKFVHHNEWNLEFVPAFKHVLYYNCCPEPYPDVTYYV SLSRFPKFYLLTVFVPCVIISILSILGFVLPPVSGDKISLQITVLLSIVVFLLLVQDKLPSSSDTFPHLGVFFMTAMCLT SLSCVMSGIIMYVYYRDITGRKIPVCIRVFFLKYMRRILCVKLKPGSGSMYEMENDVIVKNIQTLDGKQLQNGDCTKLHR GRHSIKRESVVITSKHDIPSFHEPEAESGPKHAGNSIKHYVTNEWELLAYVLDRLFMIVYILLTSINVFSYLFIMRNELH RF |
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