Gene
Gene Model ID | pfu_aug2.0_3253.1_12412 |
---|---|
Locus | scaffold3253.1 : 22685 ... 24355 : - |
To GenomeBrowser | scaffold3253.1:22685..24355 |
Genes list of scaffold | scaffold3253.1 |
Synonym | pfu_aug1.0_1917.1_44188 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_3253.1_12412.t1 | 2 | 1 | zf-B_box | 17 | 58 | 5.3e-16 | 58.2 | 2.6e-09 | 9.6e-06 | 25.3 |
pfu_aug2.0_3253.1_12412.t1 | 2 | 2 | zf-B_box | 73 | 109 | 5.3e-16 | 58.2 | 3.1e-13 | 1.2e-09 | 37.9 |
Transcript
Transcript ID | pfu_aug2.0_3253.1_12412.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3253.1_12412.t1 atgacgtttgcgtcgtcgaagataggagctcaagaggctataattaaaccgtgtgatctatgtgaggacgatgaaaacgt caactggttctgtaaggactgtgatcaaaatctatgtgacagatgtaaaaaattacatcttcgcaataatgtctcaaagt cacatatcgtactttcgatttccgaaggatttgttatggggaagaggaatttatcaaacatctgtcgagaacatgacgaa ctatttacattcttttgcaaaacttgcgataggaatatttgttcacaatgtttgtccgcgaagcataagaagcatgactt cgtagatttgcgtgaacttcaatcagaagtacagaagcagttagatgacgtcatcaaagaaaaggaaacagaaaagcaga tgatgacaagaaactttgatgacttggttcaacatgaggtcaaatcaggatatcatttaatggagcagtatgctaaaatc gatgaccgaattaaggctattaaattggccgctgatgaggaaggggagatttttaaggaatcactgagttcaataaaaca tcaacaagacgaagaggtgaaagaaggcaaacaaaaaatacatactttgaccggactctacaataaagagatccaaatcg tgcgactagaacttcgtcttcagacggcctcatcgttaaacggcttcgtgaaggaatctataacaaaacttaagtcattg aaaccgatatctattgcgataccagacgatcagcaattacattttgaggaacaagttgaagacagtcagatccgagaaac aatcggaaagctatttggatcacaaaaagtatcggtaacggagaatactaaaggaagagaaggaacgaaatgcaaggtgt tatcaaatttagagtttatcagaacattcgacttagacagaagtggaccttctttttccatctgtctcgatcccgattgt agtatatgtattggtggttacggatacgtgcacaagatgagctctgactgctctacagtcctccatcacttacctactag gatttatacctgtggttacatagcgtgtttacagtcaggtgatgctgttgtgtcttatggtggagtgacctacgtagaca gattcacctctgatgggagaagagtaggattcacagaactatcaccgaagaaaactcacgatatagctgtcaatatcaat gacgaggttgctatcagtgttaataggaactgtattattatatttccaaacaaagggaaacaactcaaagaaattgacgt cgacggtggaataaaaacattttgcacagacagagatggacacatcattgttgcacatatggaatcaccaaacttgacaa tactggatggtaggagtggagaagtcataacatcatggagagtttccatgtccgacatagagggtcttacatgtgacaga tatggaaacatactggccacaaacttggagataaatgtttatatcctgagaagaacggaaatgtcatga |
Protein
Protein ID | pfu_aug2.0_3253.1_12412.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3253.1_12412.t1 MTFASSKIGAQEAIIKPCDLCEDDENVNWFCKDCDQNLCDRCKKLHLRNNVSKSHIVLSISEGFVMGKRNLSNICREHDE LFTFFCKTCDRNICSQCLSAKHKKHDFVDLRELQSEVQKQLDDVIKEKETEKQMMTRNFDDLVQHEVKSGYHLMEQYAKI DDRIKAIKLAADEEGEIFKESLSSIKHQQDEEVKEGKQKIHTLTGLYNKEIQIVRLELRLQTASSLNGFVKESITKLKSL KPISIAIPDDQQLHFEEQVEDSQIRETIGKLFGSQKVSVTENTKGREGTKCKVLSNLEFIRTFDLDRSGPSFSICLDPDC SICIGGYGYVHKMSSDCSTVLHHLPTRIYTCGYIACLQSGDAVVSYGGVTYVDRFTSDGRRVGFTELSPKKTHDIAVNIN DEVAISVNRNCIIIFPNKGKQLKEIDVDGGIKTFCTDRDGHIIVAHMESPNLTILDGRSGEVITSWRVSMSDIEGLTCDR YGNILATNLEINVYILRRTEMS |