Gene
| Gene Model ID | pfu_aug2.0_326.1_20605 |
|---|---|
| Locus | scaffold326.1 : 38513 ... 39905 : - |
| To GenomeBrowser | scaffold326.1:38513..39905 |
| Genes list of scaffold | scaffold326.1 |
| Synonym | pfu_aug1.0_2440.1_66324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_326.1_20605.t1 | 1 | 1 | 7TM_GPCR_Srsx | 63 | 375 | 8.4e-09 | 34.9 | 9.7e-12 | 2.9e-08 | 33.2 |
| pfu_aug2.0_326.1_20605.t1 | 1 | 1 | 7tm_1 | 69 | 364 | 2.1e-35 | 122.1 | 8.7e-39 | 2.6e-35 | 121.8 |
| pfu_aug2.0_326.1_20605.t1 | 2 | 1 | 7TM_GPCR_Srv | 71 | 246 | 6.7e-07 | 28.7 | 2.3e-10 | 6.7e-07 | 28.7 |
| pfu_aug2.0_326.1_20605.t1 | 2 | 2 | 7TM_GPCR_Srv | 320 | 342 | 6.7e-07 | 28.7 | 0.43 | 1300.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_326.1_20605.t1 | gi|676468101|ref|XP_009058100.1| | hypothetical protein LOTGIDRAFT_105214 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_326.1_20605.t1 | gi|524870467|ref|XP_005092018.1| | PREDICTED: probable G-protein coupled receptor 173-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_326.1_20605.t1 | gi|269785243|ref|NP_001161549.1| | G protein coupled receptor 85-like protein [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_326.1_20605.t1 | gi|657764177|ref|XP_008316758.1| | PREDICTED: probable G-protein coupled receptor 173 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_326.1_20605.t1 | gi|734635614|ref|XP_010746404.1| | PREDICTED: probable G-protein coupled receptor 173 [Larimichthys crocea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_326.1_20605.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20605.t1 atgagtctgccattcgaactctctcagaatgtgttatctggccataattcagcagtctacatggacaacaactctgtctt tcctgaatatcgcagctccatgcaccaatcagaagatgcatctatgacgtcacatgacattaggaaaattggcctcgttt tgaaaatcttagcgattggtttgatcatgattatcgggacgttgggaaactttatcgtgattgtaactatagtgaaagac aaatatttacataggcctcctttctactatctgatcaacctatgtgtggcagatttgtcccgcgcggcgctctgtttgcc gtttgtgttagcctctgttgtgcagaactcgatttggacacacggacagacagtctgtacgttgatcggattcgctaaca cgctattcgttttcggttcagtagcttcactgttatcgatatcaatagatcgacatctagccgttgtgtattcagaattc catcgccggcgatctcagggtatggccattttaggagtaactctgctcatatggctcgtgtcattcgccatctcatttcc accagtttttggtgtagggacatacgagttcgttccggaagagtccttatgtgtcatcatccacaaagagtaccgtcaaa atgatacgttcggatttcttctggttttcactgctgttgtgtttggaactattctattctacattaggatatttctattc ctacgcgaacatcggaagatgagacccataatgcgacttccggcgcaaagtagtaactggaccttttttgggcccggaaa tggcatgattcaattgaacgttttaaatatccgcccgtttgctcctgcacagattccaacaatcagtcagaatctatctc aagctgatggaaccttaaacgtcaggacacacagaaacgagcaccttactcgtctgtttttcgtcattacaattctatac gactgcctttgggttttacatactgtccaatcatttgttgtaacatttaagggtacagattcgttttctgtgacgttcag gagtattacagcgtggttaacgtacgttcaggtgtgtaactgtccggtgatatttttatgttgctgtcaaaagttccgta gagccgccttgccaggttctgcctcattcagtatttctcgcaacacagagtccgttcaatga |
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Protein
| Protein ID | pfu_aug2.0_326.1_20605.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20605.t1 MSLPFELSQNVLSGHNSAVYMDNNSVFPEYRSSMHQSEDASMTSHDIRKIGLVLKILAIGLIMIIGTLGNFIVIVTIVKD KYLHRPPFYYLINLCVADLSRAALCLPFVLASVVQNSIWTHGQTVCTLIGFANTLFVFGSVASLLSISIDRHLAVVYSEF HRRRSQGMAILGVTLLIWLVSFAISFPPVFGVGTYEFVPEESLCVIIHKEYRQNDTFGFLLVFTAVVFGTILFYIRIFLF LREHRKMRPIMRLPAQSSNWTFFGPGNGMIQLNVLNIRPFAPAQIPTISQNLSQADGTLNVRTHRNEHLTRLFFVITILY DCLWVLHTVQSFVVTFKGTDSFSVTFRSITAWLTYVQVCNCPVIFLCCCQKFRRAALPGSASFSISRNTESVQ |
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