Gene
| Gene Model ID | pfu_aug2.0_326.1_20610 |
|---|---|
| Locus | scaffold326.1 : 200635 ... 243334 : - |
| To GenomeBrowser | scaffold326.1:200635..243334 |
| Genes list of scaffold | scaffold326.1 |
| Synonym | pfu_aug1.0_807.1_51085 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_326.1_20610.t1 | 2 | 1 | RhoGEF | 301 | 318 | 2.79993e-41 | 141.3 | 0.59 | 4400.0 | -2.7 |
| pfu_aug2.0_326.1_20610.t1 | 2 | 2 | RhoGEF | 919 | 1103 | 2.79993e-41 | 141.3 | 4.2039e-45 | 2.79993e-41 | 141.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_326.1_20610.t1 | gi|676452637|ref|XP_009053095.1| | hypothetical protein LOTGIDRAFT_144253, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_326.1_20610.t1 | gi|699612658|ref|XP_009874212.1| | PREDICTED: uncharacterized protein LOC104278816 [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_326.1_20610.t1 | gi|723139135|ref|XP_010286396.1| | PREDICTED: uncharacterized protein LOC104621572 [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_326.1_20610.t1 | gi|675416066|ref|XP_008921263.1| | PREDICTED: uncharacterized protein LOC103756919 [Manacus vitellinus] | 0.0 |
| pfu_aug2.0_326.1_20610.t1 | gi|704585850|ref|XP_010189912.1| | PREDICTED: uncharacterized protein LOC104546260 [Mesitornis unicolor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_326.1_20610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20610.t1 atggtgtcatcctcaaaggtgaaaaaagattgtaataatagaaacggtgacgtcatgggtaccatagaaacagatggatc tggtgaccttgaccctaatcatatgggccaaggtgacactctggatcgggtcgtaaccaagccaccgaaaggggatggta agagctccgatgatatcggagtggaagtgaatcgcaaaaaaagtcagttgaaaaaagtcagtgtgtcgccaagagttgaa ttaatgatgaacaacgaattgttcaagaaatatctaaaaaagaatggccatattatagaaaagctttataaaactcaagg aaaaactgtcatcggaggagtaaaaaaggcactttctaaccttgatctaaccaaaatcgactttgatgaagagtttcctc aaagtgagggcacagaaattaggtcaaggtcaagtcttagtgattatgacgcagaagaaattaaggctatatcaccgaga agtttgaaatcccagaatccggcaaaaataagggatgtaaaatccagaccgagatcgctatctctgaccggaagagacga ccctagtattaggggcatagaggaaatattacaacgacataaaaagaacttcactgacaaaaacggtgccatggaaaatg atagaaaggaaaacagaaaagagcctggacaaaggactaaatttcacgttccgagttttgccgaatttaaacggatgcgg agagaaaaattggtgaaaggtcaggaatttgtcaaaagtgttatcaataacaaggaaaatttaccgttgagcttccccta tggttttcatagacaagattcaaacgaggaattagaaacggaaatggacgaaaatagacgaagttctggtcgtcgatcat gtccggatatttccgttcattgtgacaaatcgtatgcacaaaatgtgaaacaggccttaaaatcagtaagtgacaaaatt gaatattcacggaaaagaactagtttaagtttttcaaaatctaggacatcttgtgataaaaatcaagatgaaacagatat aacaaatgaaacggaagatgattcactaaatgttagaaaacaaagcagtataaatgtcaaaattacgaaaggacgtgata tttctagggatgatacagaaatagaagctgcagaaaaaagtgatgtgaactcgaataaattaaaacccgacttgtccaat ttgaatcagtcttcagaaaacaattcggctcaaatcaatcagaggaaaacgtttcataggagtaaatcattcaatgattt ttctccgcagtgtataaaaggttcttctttaccgagcaagtcgaaaagttcgcgtcaccggcgtcgccaacattctttgt ctttaacagaatcccggacgcctgaaaaagcgtctgatccattagaactctcaacagatggcaccaccgtatatgttaca atgaatataagttcgacgatggcgccaccgttttctagtcattcgtgttcagatgaaagtgaaagtgaaaaggaaactat cactacagaaacaagaacggatattaaaagatccggtgggacggcaaacgaattgaaatgtggaggttcgatacaaaaac ctcagaatatagttcaagagcgtgtgctgaagactgaaagttcaaaacatggaacaaataatttattgcttatcacgaaa gatcatttaaaagaaaatcccacgggaacttgtcgttttgaatcccctgcaatagttagactaagtgaaatgaaaaagtc atgcgaagaaagtgccaaaattgccggaataacattgtcaaacaacgaaccagtgaaaattgcattagtaggccaaccgg gccgaacagttttacgagcttcaagaaaacggaagctgccggctcgaccaccgacgaaaaagtccgactccaaatcatct tcgacgtcatcaaactcagaaactggtccgcactcttctgatgtaacaaaggaagaaaaacgattacctccaaagcccat gttatgtaaatctctaagtgcagacaattttagcaatcaattattgccggaatcattaagtcccggaaatttctccttcc aaaacagcccatcaccgagtggttcatcggtatttgtgtttccgtctccaacaggaagtcagaacagttctgaaaacgat cttagtgcgcagaccggaactgacgaaaagaaagaaattaacgcagcaatagaaacaaaaggccttgtcatgcgatctac ctcggacgtttccaataatacagcagatgctttgaggaagcggcgtcacagaaaacagcgcccatataaaagtgaccctt ttacaggttccgggaaacttcccatcgcaaggcaaactgtatcagggcgcatgcgtggtatttacggaaaagaagagttc ttggaggactttcccgatgacgtcagtatacaggaagtcgacgaagacagcgaatttcagaatgacaagcgtatagaaac cgactttagtcgcggagtcaagcatcgccttagcaacatgagtgacgtcagcactgacagtggggtcataggtcaggaaa gcattccagatgccccacccagtccctcgagtagcgtccttagccaagggagcttattcaacagtctccatagtacggga caggactctgcagtggaagtgtccgagggacataaccacacagatgtcgaggacaaagggtacgtggatcatgacgtcac agcggacaaagccctgtacgagcgaagggagacaattcttgaaattcgtgatactgagatcagctatgggcgagatctga ggatacttagagaggagttttataaacctatgaagaataacggtctactgagttccgaacagctggaagccattttcctg aacttggatgaacttctgcacgtgaacacccagttcacagatcgcctagaagccgctgttgatcttgcagtggaacgcgg tgatgagaacttgacttcagttgtattgggagatctgttcttaaagtcaacgaaacttattctgacattcgagcactact gcgtaaatcagagtcaggcaaccatacttttagaacagctggagagagaaaaagagttgctgcgaatcttcttgaaggtc tgtcaagacgaacacgcaattttacggaggatgcaccttaagtctttcttgatggttcccgtccagagaataatgaaata tcctttgttattggagagactctttaaggctacacccaccgaacaccaagaccgagaagctctcctcaacgctaagaata aaatagaatcaatattggaacatattaattcgagaactaaaagtgcagcacaagtgaaattgtccaaacggaagtcgaac gaccggaaatcgattacagtaacggaaaagatagaagtcacaagaatagcaatggatgtcctaggatggcacaaacagga ggtctgtgacattttgactggtcaagttttggtgtctcagactcaaagtgaccagagttgggctgtgaagagactcagaa atgtcaagtattctcaagtccatgcagttctattaactcttggacagggtgaactacaaagaaacgacgaggcagaccta ctcttccctcaaaaatctgaagttatccaagcagctgttgtgttaataaaagagaaaaatggaaagttccaaaagctcag ggaaccattcctactaaatagatgtatagtgaatgtagataacgaggaaggtgaaatgtttgagctcatggaactaaaca aggaatcttatttattcaagtgtgaggacccacattggtatagactatggttacagaacatcaggcagcaaacactgaat ttgggaacttggagaaagagacggaatgccttaccaaacatcatgataaaacatttaatcacctga |
|
Protein
| Protein ID | pfu_aug2.0_326.1_20610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20610.t1 MVSSSKVKKDCNNRNGDVMGTIETDGSGDLDPNHMGQGDTLDRVVTKPPKGDGKSSDDIGVEVNRKKSQLKKVSVSPRVE LMMNNELFKKYLKKNGHIIEKLYKTQGKTVIGGVKKALSNLDLTKIDFDEEFPQSEGTEIRSRSSLSDYDAEEIKAISPR SLKSQNPAKIRDVKSRPRSLSLTGRDDPSIRGIEEILQRHKKNFTDKNGAMENDRKENRKEPGQRTKFHVPSFAEFKRMR REKLVKGQEFVKSVINNKENLPLSFPYGFHRQDSNEELETEMDENRRSSGRRSCPDISVHCDKSYAQNVKQALKSVSDKI EYSRKRTSLSFSKSRTSCDKNQDETDITNETEDDSLNVRKQSSINVKITKGRDISRDDTEIEAAEKSDVNSNKLKPDLSN LNQSSENNSAQINQRKTFHRSKSFNDFSPQCIKGSSLPSKSKSSRHRRRQHSLSLTESRTPEKASDPLELSTDGTTVYVT MNISSTMAPPFSSHSCSDESESEKETITTETRTDIKRSGGTANELKCGGSIQKPQNIVQERVLKTESSKHGTNNLLLITK DHLKENPTGTCRFESPAIVRLSEMKKSCEESAKIAGITLSNNEPVKIALVGQPGRTVLRASRKRKLPARPPTKKSDSKSS STSSNSETGPHSSDVTKEEKRLPPKPMLCKSLSADNFSNQLLPESLSPGNFSFQNSPSPSGSSVFVFPSPTGSQNSSEND LSAQTGTDEKKEINAAIETKGLVMRSTSDVSNNTADALRKRRHRKQRPYKSDPFTGSGKLPIARQTVSGRMRGIYGKEEF LEDFPDDVSIQEVDEDSEFQNDKRIETDFSRGVKHRLSNMSDVSTDSGVIGQESIPDAPPSPSSSVLSQGSLFNSLHSTG QDSAVEVSEGHNHTDVEDKGYVDHDVTADKALYERRETILEIRDTEISYGRDLRILREEFYKPMKNNGLLSSEQLEAIFL NLDELLHVNTQFTDRLEAAVDLAVERGDENLTSVVLGDLFLKSTKLILTFEHYCVNQSQATILLEQLEREKELLRIFLKV CQDEHAILRRMHLKSFLMVPVQRIMKYPLLLERLFKATPTEHQDREALLNAKNKIESILEHINSRTKSAAQVKLSKRKSN DRKSITVTEKIEVTRIAMDVLGWHKQEVCDILTGQVLVSQTQSDQSWAVKRLRNVKYSQVHAVLLTLGQGELQRNDEADL LFPQKSEVIQAAVVLIKEKNGKFQKLREPFLLNRCIVNVDNEEGEMFELMELNKESYLFKCEDPHWYRLWLQNIRQQTLN LGTWRKRRNALPNIMIKHLIT |
|