Gene
| Gene Model ID | pfu_aug2.0_326.1_20615 |
|---|---|
| Locus | scaffold326.1 : 343701 ... 353032 : + |
| To GenomeBrowser | scaffold326.1:343701..353032 |
| Genes list of scaffold | scaffold326.1 |
| Synonym | pfu_aug1.0_6849.1_38421 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_326.1_20615.t1 | 2 | 1 | Sushi | 68 | 122 | 7.1e-07 | 29.4 | 1.4e-10 | 7.1e-07 | 29.4 |
| pfu_aug2.0_326.1_20615.t1 | 2 | 2 | Sushi | 142 | 151 | 7.1e-07 | 29.4 | 1.3 | 6500.0 | -2.5 |
| pfu_aug2.0_326.1_20615.t1 | 1 | 1 | Lectin_C | 144 | 239 | 9.6e-14 | 51.9 | 5.7e-17 | 2.8e-13 | 50.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_326.1_20615.t1 | gi|554887040|ref|XP_005953070.1| | PREDICTED: CD209 antigen-like [Haplochromis burtoni] | 9.0e-19 |
| pfu_aug2.0_326.1_20615.t1 | gi|558105201|ref|XP_006084386.1| | PREDICTED: C-type lectin domain family 4 member E [Myotis lucifugus] | 2.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_326.1_20615.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20615.t1 atggacgtttatgtgtgtctggtctttgtgattatgttggtggaaacttctggagaaatattccgatttccagtgggatc tataaacggattaaatgttgggacgagattacttgttggagcttgcggtaacaccatttgttctcaaagtagtcgttgca tagagggtgacgatgacaatgctttgtgtagcgttgcagcttgtgagttaccagttgatgttaccaacgccacagtagat tttaacaatggtcttggggtgtattctaaatggacattcacttgtaatgaaggattctatccagttggatatcccaggat agcttgtcaggatagtggtgtctggtctccaacacagctacagtgtcaaccagtatgtacttctggttggatcccttttg aagcatcctgctatttcttcactactacttcaaagtcttggacggacgctaagagactatgttatcaacttggaggatat ttggttgaaattgactcgggagatgagaatgaattccttggaaagattggaggtacagatgtggccgtgcacgggacatg gagatggaccacgtctaataaactggtgacttataccaggtggcggagtggtcaaccggatctaggacaaagtgaggact gcatcttctacagatcttatagtcaagattgggatgatgcagcgtgtaactgggcgctatactatatctgtgagaagaca caactctcatag |
|
Protein
| Protein ID | pfu_aug2.0_326.1_20615.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20615.t1 MDVYVCLVFVIMLVETSGEIFRFPVGSINGLNVGTRLLVGACGNTICSQSSRCIEGDDDNALCSVAACELPVDVTNATVD FNNGLGVYSKWTFTCNEGFYPVGYPRIACQDSGVWSPTQLQCQPVCTSGWIPFEASCYFFTTTSKSWTDAKRLCYQLGGY LVEIDSGDENEFLGKIGGTDVAVHGTWRWTTSNKLVTYTRWRSGQPDLGQSEDCIFYRSYSQDWDDAACNWALYYICEKT QLS |
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