Gene
| Gene Model ID | pfu_aug2.0_326.1_20623 |
|---|---|
| Locus | scaffold326.1 : 502291 ... 503785 : + |
| To GenomeBrowser | scaffold326.1:502291..503785 |
| Genes list of scaffold | scaffold326.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| small nuclear ribonucleoprotein sm d3 | GO:0019013 GO:0030529 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_326.1_20623.t1 | 1 | 1 | LSM | 10 | 73 | 1.6e-11 | 43.5 | 1.4e-15 | 2.0e-11 | 43.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_326.1_20623.t1 | gi|755958577|ref|XP_011304119.1| | PREDICTED: small nuclear ribonucleoprotein Sm D3 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_326.1_20623.t1 | gi|749799058|ref|XP_011153057.1| | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_326.1_20623.t1 | gi|156550773|ref|XP_001605596.1| | PREDICTED: small nuclear ribonucleoprotein Sm D3 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_326.1_20623.t1 | gi|749799056|ref|XP_011153056.1| | PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_326.1_20623.t1 | gi|91084331|ref|XP_972583.1| | PREDICTED: small nuclear ribonucleoprotein Sm D3 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_326.1_20623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20623.t1 atgtctattggagtcccaatcaaggttctgcatgaagcagaaggtcatatagtgacatgtgaaacaacgaccggggaagt gtacagaggaaagttggtagaagccgaagataacatgaactgtcaaatgtcagcaatcacagttacatacagggacggtc gtgtcgcacaactagaaaatgtatatcttagaggcagcaaaatcagatttcttattttaccagacatgttgaaaaatgcc cccatgttcaaaagagtacaaggcaaaggaggatctgcaaacagagggaaatcagctattcttcgtacacaaggtttgct ttag |
|
Protein
| Protein ID | pfu_aug2.0_326.1_20623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_326.1_20623.t1 MSIGVPIKVLHEAEGHIVTCETTTGEVYRGKLVEAEDNMNCQMSAITVTYRDGRVAQLENVYLRGSKIRFLILPDMLKNA PMFKRVQGKGGSANRGKSAILRTQGLL |
|