Gene
| Gene Model ID | pfu_aug2.0_3261.1_05794 |
|---|---|
| Locus | scaffold3261.1 : 4291 ... 8456 : + |
| To GenomeBrowser | scaffold3261.1:4291..8456 |
| Genes list of scaffold | scaffold3261.1 |
| Synonym | pfu_aug1.0_44198.1_70506 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3261.1_05794.t1 | 1 | 1 | COX6B | 38 | 91 | 8.2e-08 | 32.1 | 6.7e-12 | 9.9e-08 | 31.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3261.1_05794.t1 | gi|288856326|ref|NP_001165815.1| | cytochrome c oxidase subunit 6B1 [Nasonia vitripennis] | 1.0e-22 |
| pfu_aug2.0_3261.1_05794.t1 | gi|642915391|ref|XP_008190597.1| | PREDICTED: cytochrome c oxidase subunit 6B2 isoform X1 [Tribolium castaneum] | 1.0e-22 |
| pfu_aug2.0_3261.1_05794.t1 | gi|512911411|ref|XP_004927405.1| | PREDICTED: cytochrome c oxidase subunit 6B1 isoform X2 [Bombyx mori] | 1.0e-21 |
| pfu_aug2.0_3261.1_05794.t1 | gi|195999632|ref|XP_002109684.1| | hypothetical protein TRIADDRAFT_21297 [Trichoplax adhaerens] | 1.0e-21 |
| pfu_aug2.0_3261.1_05794.t1 | gi|91078412|ref|XP_974620.1| | PREDICTED: cytochrome c oxidase subunit 6B2 isoform X2 [Tribolium castaneum] | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_3261.1_05794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3261.1_05794.t1 atgtctgattgtgaccttaaaaccccttcccagccagcagcacaactgagaaatgacacactggtggaaagaaatcgtga caccgatctaagaacagctccatttgattccaggtttccaactcagaaccaaatgacatattgtttccagagcttctgcg actaccagcgctgcaagaaaatcaagggagaggattatttaccatgtgaatacttcaagcgttgctataggtccatgtgt ccaaatcatatcagagagagatatgaagaagccctagcagaagacagattcccagccacattttga |
|
Protein
| Protein ID | pfu_aug2.0_3261.1_05794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3261.1_05794.t1 MSDCDLKTPSQPAAQLRNDTLVERNRDTDLRTAPFDSRFPTQNQMTYCFQSFCDYQRCKKIKGEDYLPCEYFKRCYRSMC PNHIRERYEEALAEDRFPATF |
|