Gene
| Gene Model ID | pfu_aug2.0_3262.1_09092 |
|---|---|
| Locus | scaffold3262.1 : 42736 ... 58430 : + |
| To GenomeBrowser | scaffold3262.1:42736..58430 |
| Genes list of scaffold | scaffold3262.1 |
| Synonym | pfu_aug1.0_500.1_15098 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3262.1_09092.t1 | 3 | 1 | 7tm_1 | 67 | 311 | 1.1e-39 | 136.1 | 2.2e-28 | 5.5e-25 | 87.9 |
| pfu_aug2.0_3262.1_09092.t1 | 3 | 2 | 7tm_1 | 402 | 468 | 1.1e-39 | 136.1 | 1.7e-11 | 4.3e-08 | 32.6 |
| pfu_aug2.0_3262.1_09092.t1 | 3 | 3 | 7tm_1 | 489 | 556 | 1.1e-39 | 136.1 | 2.0e-09 | 5.0e-06 | 25.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3262.1_09092.t1 | gi|734634691|ref|XP_010745894.1| | PREDICTED: uncharacterized protein LOC104932386 [Larimichthys crocea] | 4.0e-14 |
| pfu_aug2.0_3262.1_09092.t1 | gi|524877931|ref|XP_005095660.1| | PREDICTED: neuropeptide FF receptor 1-like [Aplysia californica] | 1.0e-12 |
| pfu_aug2.0_3262.1_09092.t1 | gi|734645339|ref|XP_010751754.1| | PREDICTED: probable G-protein coupled receptor 25 [Larimichthys crocea] | 2.0e-10 |
| pfu_aug2.0_3262.1_09092.t1 | gi|683913121|ref|XP_009088658.1| | PREDICTED: P2Y purinoceptor 4 [Serinus canaria] | 6.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_3262.1_09092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3262.1_09092.t1 atggaggtaacaacaggtaatatccagtcaaacatctcaatctacaaagaaacaacagatggatacaatgggtatggtag aatagctgagtgtgtcttctctgtcacgctaactattgttggtttaataggaaattcccatgctctcatcataaatgttc aaagattccgatcccaaaggaaggaaagaacagtagaaaagaacccgtatatagtatttgttctcagccttgcaatcctc gacatgtttacttccttagttattttaccgttgggcaatgccgatttggcatacaggttcacaccatattcagacgatat gtgcaagtttttccgatatctgcagtttgtcatacatatcagcagtgtccttcacatcgccttgatcagcatccattgtt gtcgtcaggtgtgtttcccaagatcaaggcagatcaacggcaaatatgcattcaggttctgtgtatgtttcgacttgttc tcagctacaggagctgtaattgtcatctttctatcaggaaataagactataaccattgatggtgtgacaggagcattttg ttttatcggccaaagcagcaataaccctatgtttctacgcatcgccatgaccatcctatcagtttgttttctcatctgtc tggtcgtcataatatcatgttattgtgctttgattgtacacagattgcgtaaaagaaaatcaaagtccgaccgctccatg acccaggacgaaataaaactccagaagacaattgttacccttattatcttaacaacttcatttgtgatcgcctacatacc tttcatgatactagcagtcattaaagctgtcgacaaggactttcaaaataacttaagcggagcaagttctgctgcacacg gaatattcctccgctttccactcgtgaataatgtcgttaatccgtttatttatggtctcaaagacttagagtttagaaga agccctcgtatgtgtatggttccagcggggatttcaactgtaaaaaacgatatggaggtgacaacagattttatccagtc aaacatctcaatcaataatggtacaacagatggatatagtgggtatgatagaatagctgggtgtgtctactctgttacgc taactatcgttggtttaatagggaattcccatgctctcatcattaatgttcaaagattccaatcccaaagaaagcaaaga agagtagaaaagaatccgtatgtagtatttgtactcagccttgcaatccttgacatgtttacttccctagttattttacc gatggacaatgctgatttggcatacagattcacaccatattcagacggaatgtgtaagtttttccgatatctacagtttg tgatacatgtcagcagtgtccttcatatcgtcttgatcagcattcattgttgtcgtcagatggcgtcacagaaagtcgaa gtccaaccgctccatgacccaggacgaaaaaaaattcagaagacaattgttacccttgttatcttaacagctttatttgt gatcgcctacatacctttcatgatactagcagtcattaaagctgtcgacaaggagtttcaaaataacttaagcggagcaa gttctgctgcacacggaatattcatccgctttccactcgtgaataatgtcgttaatccgtttatctatggtctgaaagac ttggagtttagaagaaggttatttgatatgtatccatgtttgaaatcttccaagacacaggagattgaaatcggttctat tccttctcccgaatag |
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Protein
| Protein ID | pfu_aug2.0_3262.1_09092.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3262.1_09092.t1 MEVTTGNIQSNISIYKETTDGYNGYGRIAECVFSVTLTIVGLIGNSHALIINVQRFRSQRKERTVEKNPYIVFVLSLAIL DMFTSLVILPLGNADLAYRFTPYSDDMCKFFRYLQFVIHISSVLHIALISIHCCRQVCFPRSRQINGKYAFRFCVCFDLF SATGAVIVIFLSGNKTITIDGVTGAFCFIGQSSNNPMFLRIAMTILSVCFLICLVVIISCYCALIVHRLRKRKSKSDRSM TQDEIKLQKTIVTLIILTTSFVIAYIPFMILAVIKAVDKDFQNNLSGASSAAHGIFLRFPLVNNVVNPFIYGLKDLEFRR SPRMCMVPAGISTVKNDMEVTTDFIQSNISINNGTTDGYSGYDRIAGCVYSVTLTIVGLIGNSHALIINVQRFQSQRKQR RVEKNPYVVFVLSLAILDMFTSLVILPMDNADLAYRFTPYSDGMCKFFRYLQFVIHVSSVLHIVLISIHCCRQMASQKVE VQPLHDPGRKKIQKTIVTLVILTALFVIAYIPFMILAVIKAVDKEFQNNLSGASSAAHGIFIRFPLVNNVVNPFIYGLKD LEFRRRLFDMYPCLKSSKTQEIEIGSIPSPE |
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