Gene
| Gene Model ID | pfu_aug2.0_327.1_23865 |
|---|---|
| Locus | scaffold327.1 : 46569 ... 51125 : - |
| To GenomeBrowser | scaffold327.1:46569..51125 |
| Genes list of scaffold | scaffold327.1 |
| Synonym | pfu_aug1.0_1009.1_00580 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_327.1_23865.t1 | 1 | 1 | adh_short | 8 | 116 | 9.9e-21 | 74.3 | 1.1e-23 | 1.2e-20 | 74.0 |
| pfu_aug2.0_327.1_23865.t1 | 1 | 1 | KR | 9 | 108 | 6.4e-14 | 52.0 | 1.2e-16 | 1.2e-13 | 51.0 |
| pfu_aug2.0_327.1_23865.t1 | 2 | 1 | NAD_binding_10 | 10 | 88 | 4.1e-07 | 30.1 | 1.3e-09 | 1.4e-06 | 28.4 |
| pfu_aug2.0_327.1_23865.t1 | 2 | 1 | adh_short_C2 | 16 | 92 | 1.8e-09 | 37.7 | 7.0e-11 | 7.4e-08 | 32.4 |
| pfu_aug2.0_327.1_23865.t1 | 2 | 2 | adh_short_C2 | 109 | 153 | 1.8e-09 | 37.7 | 0.049 | 52.0 | 3.4 |
| pfu_aug2.0_327.1_23865.t1 | 2 | 2 | NAD_binding_10 | 116 | 140 | 4.1e-07 | 30.1 | 1.3 | 1300.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_327.1_23865.t1 | gi|611991512|ref|XP_007482173.1| | PREDICTED: dehydrogenase/reductase SDR family member 11 [Monodelphis domestica] | 4.0e-36 |
| pfu_aug2.0_327.1_23865.t1 | gi|72011150|ref|XP_780227.1| | PREDICTED: dehydrogenase/reductase SDR family member 11 [Strongylocentrotus purpuratus] | 3.0e-30 |
| pfu_aug2.0_327.1_23865.t1 | gi|699247241|ref|XP_009859977.1| | PREDICTED: dehydrogenase/reductase SDR family member 11 [Ciona intestinalis] | 1.0e-29 |
| pfu_aug2.0_327.1_23865.t1 | gi|410910224|ref|XP_003968590.1| | PREDICTED: dehydrogenase/reductase SDR family member 11-like [Takifugu rubripes] | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_327.1_23865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23865.t1 atggagcgctggagagggagggttgccttggtaacaggtggttccatgggaatcggcgaggccacagcaaagaaattggc ggcacatggcatgaaagtcgtcgtctgtgctcgtagttttgacaaattagaggctctgtccaaagaaaatgccaacatac atccaatcagatgtgaccttcgggacaaaagcgacatctaccggatgttccaagagatcagagataaatttggtggtgtg gacgtctgtgttaacagtgctgggttatctctggattcccctatcatagacggcgatccggaccagtgggatcatatgtg ggagagcataagcccaggtctggtccatacaaactttgctcaaacattgatgggaaaagaagctgccgaaaaattatatt ccacacgctcggggttgaaagcagaggacctggccagaaccatagagtttgtgctgtcatcaccaccatatgtgcaggtc aatgaagtaatgatgagacacattgagcaggttgtttga |
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Protein
| Protein ID | pfu_aug2.0_327.1_23865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23865.t1 MERWRGRVALVTGGSMGIGEATAKKLAAHGMKVVVCARSFDKLEALSKENANIHPIRCDLRDKSDIYRMFQEIRDKFGGV DVCVNSAGLSLDSPIIDGDPDQWDHMWESISPGLVHTNFAQTLMGKEAAEKLYSTRSGLKAEDLARTIEFVLSSPPYVQV NEVMMRHIEQVV |
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