Gene
| Gene Model ID | pfu_aug2.0_327.1_23870 |
|---|---|
| Locus | scaffold327.1 : 126652 ... 129635 : - |
| To GenomeBrowser | scaffold327.1:126652..129635 |
| Genes list of scaffold | scaffold327.1 |
| Synonym | pfu_aug1.0_92810.1_56824 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_327.1_23870.t1 | 1 | 1 | PTS_2-RNA | 6 | 174 | 6.8e-26 | 90.7 | 1.2e-29 | 8.9e-26 | 90.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_327.1_23870.t1 | gi|302782377|ref|XP_002972962.1| | hypothetical protein SELMODRAFT_98231, partial [Selaginella moellendorffii] | 8.0e-23 |
| pfu_aug2.0_327.1_23870.t1 | gi|302823461|ref|XP_002993383.1| | hypothetical protein SELMODRAFT_137049, partial [Selaginella moellendorffii] | 2.0e-22 |
| pfu_aug2.0_327.1_23870.t1 | gi|599105920|ref|XP_007382726.1| | hypothetical protein PUNSTDRAFT_51732 [Punctularia strigosozonata HHB-11173 SS5] | 3.0e-22 |
| pfu_aug2.0_327.1_23870.t1 | gi|471223258|ref|XP_004030411.1| | hypothetical protein IMG5_161250 [Ichthyophthirius multifiliis] | 5.0e-21 |
| pfu_aug2.0_327.1_23870.t1 | gi|583971914|ref|XP_006781375.1| | PREDICTED: tRNA 2'-phosphotransferase 1-like isoform X3 [Neolamprologus brichardi] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_327.1_23870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23870.t1 atggctcactactacatcggacgtaagatggtgaagatgctacgtcacagagcggacgctgagggtctagatcctgaccg tgaggggtttgtggacttggacacgctcctgaaacatcagaagatgaggaattactcctaccaagacgttgtcagagcta tcgctgtagacgataagatgaggttccaggcagccatgatctgcgatagggaacaaatccgtgcggtgcaaggccacaca atggacgcgatccgtgatcaaacacaaccggtaagaagcttatcacagctgcctacttttgacgactacggggaatattc agacctccttatccacccgttccaccgtacgacgtacgaccaatgggagagaatccgtcaccacggtctgtgtcgacgct tccgtaagtacgtcacgttcgcctacggtcagccaatggacgacagcgtctttatttacctggatgtaatcaaggcgttt gatgacgggttgcctttgtatataggtagtgactatttattctgttccggggatgatagcgggtacatacgtccttatta cttcagtgctgtggatatcaacggacaacgcatttggcacaactattag |
|
Protein
| Protein ID | pfu_aug2.0_327.1_23870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23870.t1 MAHYYIGRKMVKMLRHRADAEGLDPDREGFVDLDTLLKHQKMRNYSYQDVVRAIAVDDKMRFQAAMICDREQIRAVQGHT MDAIRDQTQPVRSLSQLPTFDDYGEYSDLLIHPFHRTTYDQWERIRHHGLCRRFRKYVTFAYGQPMDDSVFIYLDVIKAF DDGLPLYIGSDYLFCSGDDSGYIRPYYFSAVDINGQRIWHNY |
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