Gene
| Gene Model ID | pfu_aug2.0_327.1_23871 |
|---|---|
| Locus | scaffold327.1 : 132906 ... 139070 : + |
| To GenomeBrowser | scaffold327.1:132906..139070 |
| Genes list of scaffold | scaffold327.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_327.1_23871.t1 | 1 | 1 | PDZ | 11 | 88 | 2.7e-11 | 43.4 | 5.8e-15 | 4.3e-11 | 42.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_327.1_23871.t1 | gi|676490593|ref|XP_009065320.1| | hypothetical protein LOTGIDRAFT_108347 [Lottia gigantea] | 4.0e-35 |
| pfu_aug2.0_327.1_23871.t1 | gi|684386941|ref|XP_009168621.1| | hypothetical protein T265_05366 [Opisthorchis viverrini] | 4.0e-26 |
| pfu_aug2.0_327.1_23871.t1 | gi|675879563|ref|XP_009025311.1| | hypothetical protein HELRODRAFT_154200, partial [Helobdella robusta] | 2.0e-21 |
| pfu_aug2.0_327.1_23871.t1 | gi|676454252|ref|XP_009053620.1| | hypothetical protein LOTGIDRAFT_116635 [Lottia gigantea] | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_327.1_23871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23871.t1 atggctgataaccagccagtattggtgaaattaaggaggaaagaatcgggcacaccatggggatttacgatgcagggagg gtacgaccaaggaaaatgtttatatattcaaaaggtaaatcccaagagtgtagcctacaagagtggattacggattgggg atggtatcatctacatatgtcatacaccagcccagtatctacatcatcaacaagccaagatggagattatccgtgctggt aacgagttagacctggtggtccaaagggatgttgtagactgcggtcatacgacccaggtggatggaccaagccagtccaa acaaagatccacagtggaggaggagtccactatttacaaaggatacactgatccaaacgtacagtctaggtccttcaaaa tattgcagcagtcgctcaactactcagaagcccctcctgaaaaatcaggttcgtatgtgcatcgcacgacccagatctca cagtctagcatggtaactagacatgttcaagaacaagttcacccatctccatctaagccagatcaagaacaagtttccat gcgagatttcttacatttgatgggatctcatggaatagatgtttga |
|
Protein
| Protein ID | pfu_aug2.0_327.1_23871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23871.t1 MADNQPVLVKLRRKESGTPWGFTMQGGYDQGKCLYIQKVNPKSVAYKSGLRIGDGIIYICHTPAQYLHHQQAKMEIIRAG NELDLVVQRDVVDCGHTTQVDGPSQSKQRSTVEEESTIYKGYTDPNVQSRSFKILQQSLNYSEAPPEKSGSYVHRTTQIS QSSMVTRHVQEQVHPSPSKPDQEQVSMRDFLHLMGSHGIDV |
|