Gene
| Gene Model ID | pfu_aug2.0_327.1_23873 |
|---|---|
| Locus | scaffold327.1 : 151159 ... 161125 : - |
| To GenomeBrowser | scaffold327.1:151159..161125 |
| Genes list of scaffold | scaffold327.1 |
| Synonym | pfu_aug1.0_4688.1_37943 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tetratricopeptide repeat protein 26-like | GO:0005813 GO:0007224 GO:0030992 GO:0036064 GO:0042073 GO:0042384 GO:0072372 GO:0097542 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_327.1_23873.t1 | 4 | 1 | TPR_11 | 32 | 45 | 1.5e-09 | 37.3 | 2.3 | 2300.0 | -1.7 |
| pfu_aug2.0_327.1_23873.t1 | 2 | 1 | TPR_16 | 32 | 83 | 2.8e-07 | 31.0 | 0.0044 | 4.4 | 8.1 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 1 | TPR_19 | 33 | 81 | 6.1e-09 | 36.0 | 0.013 | 13.0 | 6.1 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 1 | TPR_14 | 33 | 46 | 6.1e-06 | 26.4 | 9.3 | 9200.0 | -2.2 |
| pfu_aug2.0_327.1_23873.t1 | 3 | 1 | Apc3 | 55 | 109 | 4.3e-10 | 39.5 | 6.3e-06 | 0.0063 | 16.6 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 1 | TPR_12 | 58 | 80 | 1.1e-06 | 28.4 | 0.025 | 24.0 | 4.9 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 1 | TPR_6 | 60 | 84 | 2.3e-07 | 30.8 | 0.0049 | 4.9 | 7.8 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 1 | TPR_2 | 61 | 82 | 1.0e-08 | 34.3 | 0.00049 | 0.49 | 10.4 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 1 | TPR_1 | 62 | 81 | 1.1e-07 | 31.1 | 0.019 | 19.0 | 5.0 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 2 | TPR_11 | 63 | 115 | 1.5e-09 | 37.3 | 3.9e-08 | 3.8e-05 | 23.2 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 2 | TPR_14 | 63 | 97 | 6.1e-06 | 26.4 | 0.0014 | 1.4 | 9.7 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 2 | TPR_19 | 69 | 108 | 6.1e-09 | 36.0 | 0.21 | 210.0 | 2.3 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 2 | TPR_1 | 90 | 115 | 1.1e-07 | 31.1 | 1.2e-05 | 0.012 | 15.2 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 2 | TPR_2 | 91 | 115 | 1.0e-08 | 34.3 | 0.0015 | 1.5 | 8.9 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 2 | TPR_12 | 91 | 115 | 1.1e-06 | 28.4 | 0.0015 | 1.5 | 8.8 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 2 | TPR_6 | 95 | 111 | 2.3e-07 | 30.8 | 2.3 | 2300.0 | -0.6 |
| pfu_aug2.0_327.1_23873.t1 | 3 | 2 | Apc3 | 153 | 208 | 4.3e-10 | 39.5 | 2.5e-07 | 0.00025 | 21.1 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 3 | TPR_11 | 153 | 198 | 1.5e-09 | 37.3 | 0.00011 | 0.11 | 12.1 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 3 | TPR_14 | 153 | 188 | 6.1e-06 | 26.4 | 0.0028 | 2.8 | 8.8 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 3 | TPR_6 | 154 | 177 | 2.3e-07 | 30.8 | 0.016 | 16.0 | 6.2 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 3 | TPR_1 | 155 | 177 | 1.1e-07 | 31.1 | 0.0024 | 2.3 | 7.9 |
| pfu_aug2.0_327.1_23873.t1 | 2 | 2 | TPR_16 | 155 | 218 | 2.8e-07 | 31.0 | 9.9e-07 | 0.00098 | 19.7 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 3 | TPR_12 | 155 | 177 | 1.1e-06 | 28.4 | 0.0038 | 3.8 | 7.5 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 3 | TPR_2 | 156 | 178 | 1.0e-08 | 34.3 | 0.002 | 2.0 | 8.5 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 4 | TPR_12 | 156 | 177 | 1.1e-06 | 28.4 | 0.0051 | 5.1 | 7.1 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 3 | TPR_19 | 165 | 225 | 6.1e-09 | 36.0 | 8.5e-08 | 8.4e-05 | 22.8 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 4 | TPR_2 | 189 | 216 | 1.0e-08 | 34.3 | 0.02 | 20.0 | 5.4 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 4 | TPR_6 | 189 | 217 | 2.3e-07 | 30.8 | 0.00016 | 0.16 | 12.5 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 4 | TPR_1 | 191 | 197 | 1.1e-07 | 31.1 | 3.4 | 3300.0 | -2.1 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 4 | TPR_14 | 199 | 223 | 6.1e-06 | 26.4 | 0.33 | 330.0 | 2.3 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 5 | TPR_12 | 207 | 238 | 1.1e-06 | 28.4 | 0.18 | 180.0 | 2.1 |
| pfu_aug2.0_327.1_23873.t1 | 4 | 4 | TPR_11 | 211 | 233 | 1.5e-09 | 37.3 | 1.5 | 1500.0 | -1.1 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 5 | TPR_2 | 218 | 233 | 1.0e-08 | 34.3 | 3.1 | 3000.0 | -1.4 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 4 | TPR_19 | 259 | 272 | 6.1e-09 | 36.0 | 1.0 | 1000.0 | 0.1 |
| pfu_aug2.0_327.1_23873.t1 | 3 | 3 | Apc3 | 284 | 315 | 4.3e-10 | 39.5 | 0.69 | 680.0 | 0.4 |
| pfu_aug2.0_327.1_23873.t1 | 5 | 5 | TPR_19 | 284 | 303 | 6.1e-09 | 36.0 | 1.4 | 1400.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_327.1_23873.t1 | gi|585662850|ref|XP_006816824.1| | PREDICTED: tetratricopeptide repeat protein 26-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_327.1_23873.t1 | gi|524911983|ref|XP_005110847.1| | PREDICTED: tetratricopeptide repeat protein 26-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_327.1_23873.t1 | gi|390362429|ref|XP_003730152.1| | PREDICTED: intraflagellar transport protein 56 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_327.1_23873.t1 | gi|260823860|ref|XP_002606886.1| | hypothetical protein BRAFLDRAFT_60331 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_327.1_23873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23873.t1 atgctctcaagagcaaagccggccatagggcctggctcaacaactccagccaaggagaacaagaaaaagaaaaagatgcc aaaaccagatgacttcttgtctatgagagattacacaggagccattacattgttggagtttaatcgtaacagtggtaatg gtagtgaggaaacagatttatggattgcttactgtgccttccatcttggagactataaaagatccatggaggaatatgag aggatgaccaagcgcgggggatgtccacccgatacatggaccaacctggcatgttgttacttcttccttggcatgtatcc agagggtgacgaggcctgcaggaaagggccccaaggacgtttacagaacagactacagtttcacttgtcacagaagtttg gagacgagaagcgactgatgaactatcatcagaacctacaggacgtgatagaggatcaattatcgttagcgtccatacac tacctgagaagtcattatcaggaagctatagatatatataaaagaatattgttagacaatagggatttccttgcactgaa tgtatatgtagccctatgttattacaaattagactactatgatgtttcacaagaggtgttagccgtgtatttacaacagt atcctgacagtgctacagcactcaatctcaaagcttgtaatcattttaggttgtacaatggaaaagctgccgaggttgtg ttcagaggaggtgaggggtcattacagattctaccaccgttaattgatgtgataccggaagctagactcaacctggtcat ctaccatctcaaacaagagaaggaatattttatattagaacttctcattacagatgatattgcagaagcatataacctga taaaggatctagaacctactaccccccaggagtacattctgaagggtgtggttaatgcagccctcgggcaagagcaggga tcggatggacatggtgctggtgtaagtcttcagattttgatatgtcagaagcagcatacatatgtatatttaaaatgcca gtag |
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Protein
| Protein ID | pfu_aug2.0_327.1_23873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23873.t1 MLSRAKPAIGPGSTTPAKENKKKKKMPKPDDFLSMRDYTGAITLLEFNRNSGNGSEETDLWIAYCAFHLGDYKRSMEEYE RMTKRGGCPPDTWTNLACCYFFLGMYPEGDEACRKGPQGRLQNRLQFHLSQKFGDEKRLMNYHQNLQDVIEDQLSLASIH YLRSHYQEAIDIYKRILLDNRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQQYPDSATALNLKACNHFRLYNGKAAEVV FRGGEGSLQILPPLIDVIPEARLNLVIYHLKQEKEYFILELLITDDIAEAYNLIKDLEPTTPQEYILKGVVNAALGQEQG SDGHGAGVSLQILICQKQHTYVYLKCQ |
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